Gene Sfum_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1376 
Symbol 
ID4461230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1711804 
End bp1712244 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content63% 
IMG OID639702144 
ProductRpiB/LacA/LacB family sugar-phosphate isomerase 
Protein accessionYP_845502 
Protein GI116748815 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAA TGGTGGGATG CGATCACGGC GGTTTCGAAT TGAAGGAGAA GATCGTCGCG 
CACCTTGGGA CTCTCGGTCA CGAGGTGGTG GACGCCGGAA CGAACAGCCT CGAATCGGTG
GATTACCCCC ACTATGCAAT GAAAGTGGCC CGGGCGGTCG CCAGGGGTGA GGCCGACCGC
GGGATTCTGG TCTGCGGGAG CGGCATCGGC ATGAACATGA CCGCGAATCG CGTCTCCGGC
ATCCGGGCGG TCCTGGCGTA CGAGCCATAC GGGGCCATCA TGAGCCGGCG TCACAACGAC
AGCAACGTTC TGTGCATGGG AGGCCGGTTC ACGGGATTGG ACATGGCCTT GCAGATTGTG
GACGTCTGGC TTCGGGAGCC CTTCGAGGGC GGACGCCATC AGCGGCGGAT CGAGCTGATC
GACCGCCTGG TCGATGCCTG A
 
Protein sequence
MKIMVGCDHG GFELKEKIVA HLGTLGHEVV DAGTNSLESV DYPHYAMKVA RAVARGEADR 
GILVCGSGIG MNMTANRVSG IRAVLAYEPY GAIMSRRHND SNVLCMGGRF TGLDMALQIV
DVWLREPFEG GRHQRRIELI DRLVDA