Gene Sfum_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1374 
Symbol 
ID4461228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1709679 
End bp1710422 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content62% 
IMG OID639702142 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_845500 
Protein GI116748813 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA AGCGCGTTGC CGTCGTGACC GGCGCGAGCA GGGGAATCGG CAGGGGCATT 
GCCGTGGCGC TGGCTCGACC GGGATATGAC ATCATCGTCA ACTATAACGC CAGCCCCGGA
CCCGCCGAAG AGACGGCGGC CGCGGTCGCC GCCCGGGGAG GTTCCGCCCA CCTGCACCGT
TTCAATATCG CGGACGCGGA TTCGGTCAAG GAAGCGTTCA AGGAAATCAT CAAGACCTAC
GGCAGAGTGG ATGTCCTGGT CAACAACGCG GGGATCGCCC GCGACAACCT GCTCGTTCTC
ATGAAGGCTT CGGAGTGGGA TGAAGTACTG GACACCAACC TCCGGGGGGC ATTCCTGTGC
ACTCAGGCGG TCGTCAAGCA GATGCTGCGG CAGAGATACG GCCGGATCGT GAATGTAACC
TCCGTGGTCG GTGTGATCGG CAACGCCGGC CAATGCAACT ACTCCGCCGC CAAAGCCGGG
CTGATCGGAT TCACGCGGTC CATCGCCCGC GAACTGGTGT CGAGAAACAT TACCGTCAAC
GCGGTGGCTC CCGGCTTCAT CGAAACCGAC ATGACGCTGG CATTGCCCGA GACGGCCAGG
CAAAGCCTGC TTCAGCAGAT ACCCGCCGGA CGCTGCGGCA CGCCCGAGGA CATCGCGGCC
GCCGTGGTTT TTCTGGCATC CGAGGCGGCC GGATATATCA CCGGGCAGGT CATTCACGTC
AACGGTGGAA TGTTTATGGG CTGA
 
Protein sequence
MSEKRVAVVT GASRGIGRGI AVALARPGYD IIVNYNASPG PAEETAAAVA ARGGSAHLHR 
FNIADADSVK EAFKEIIKTY GRVDVLVNNA GIARDNLLVL MKASEWDEVL DTNLRGAFLC
TQAVVKQMLR QRYGRIVNVT SVVGVIGNAG QCNYSAAKAG LIGFTRSIAR ELVSRNITVN
AVAPGFIETD MTLALPETAR QSLLQQIPAG RCGTPEDIAA AVVFLASEAA GYITGQVIHV
NGGMFMG