Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1368 |
Symbol | |
ID | 4460760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1703848 |
End bp | 1704402 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639702136 |
Product | hypothetical protein |
Protein accession | YP_845494 |
Protein GI | 116748807 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000101542 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATTC GAGTCGACGA AATACCGGAA TCGGGGAGGT TTCTTCATTT CCACTGGGAT GAAGACCACC TGCGCCAGTT CCTGCCTCCG GAGGATCCTT TCGAGATCGA GCTGGTGCGG CCGGTCAATG TGGACCTTGA AATTCAGAAA AGAATCGACC ACATCCGCAT CACGGGGACC ATCAGGGGGG TCTTGCGGCT GGGTTGCCAT CGGTGCCTGA AACCTTTCCA GTGGTCCATG GATGAAACCG TGGACGTCTT TCTCCTCGAG GAAGAAAAGG CTCCTCAGGA GGAGGAGCTC GAGCTGGAAG ACGAAGAGCT CGACTTCGAA TTCTTCGACG GTCAAATCAT CGAGATCGAC CAGTTGGTGG CCGAACAGAT CTTCCTGGCG TTGCCGTTCA AGGTGCTCTG TTCCGAGGAC TGCCGCGGCA TCTGCCCCCG GTGCGGGGTC AATCTGAACG ATGAGGAATG CCGTTGCGCG ATGGAGAAGG AACCTTCGGC ATTCTCCCGG CTCGAGGCCA TCAAGTCGCG GCTGCCGGGC TGGAGGGAAG AATAG
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Protein sequence | MRIRVDEIPE SGRFLHFHWD EDHLRQFLPP EDPFEIELVR PVNVDLEIQK RIDHIRITGT IRGVLRLGCH RCLKPFQWSM DETVDVFLLE EEKAPQEEEL ELEDEELDFE FFDGQIIEID QLVAEQIFLA LPFKVLCSED CRGICPRCGV NLNDEECRCA MEKEPSAFSR LEAIKSRLPG WREE
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