Gene Sfum_1368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1368 
Symbol 
ID4460760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1703848 
End bp1704402 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content57% 
IMG OID639702136 
Producthypothetical protein 
Protein accessionYP_845494 
Protein GI116748807 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000101542 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATTC GAGTCGACGA AATACCGGAA TCGGGGAGGT TTCTTCATTT CCACTGGGAT 
GAAGACCACC TGCGCCAGTT CCTGCCTCCG GAGGATCCTT TCGAGATCGA GCTGGTGCGG
CCGGTCAATG TGGACCTTGA AATTCAGAAA AGAATCGACC ACATCCGCAT CACGGGGACC
ATCAGGGGGG TCTTGCGGCT GGGTTGCCAT CGGTGCCTGA AACCTTTCCA GTGGTCCATG
GATGAAACCG TGGACGTCTT TCTCCTCGAG GAAGAAAAGG CTCCTCAGGA GGAGGAGCTC
GAGCTGGAAG ACGAAGAGCT CGACTTCGAA TTCTTCGACG GTCAAATCAT CGAGATCGAC
CAGTTGGTGG CCGAACAGAT CTTCCTGGCG TTGCCGTTCA AGGTGCTCTG TTCCGAGGAC
TGCCGCGGCA TCTGCCCCCG GTGCGGGGTC AATCTGAACG ATGAGGAATG CCGTTGCGCG
ATGGAGAAGG AACCTTCGGC ATTCTCCCGG CTCGAGGCCA TCAAGTCGCG GCTGCCGGGC
TGGAGGGAAG AATAG
 
Protein sequence
MRIRVDEIPE SGRFLHFHWD EDHLRQFLPP EDPFEIELVR PVNVDLEIQK RIDHIRITGT 
IRGVLRLGCH RCLKPFQWSM DETVDVFLLE EEKAPQEEEL ELEDEELDFE FFDGQIIEID
QLVAEQIFLA LPFKVLCSED CRGICPRCGV NLNDEECRCA MEKEPSAFSR LEAIKSRLPG
WREE