Gene Sfum_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1366 
Symbol 
ID4460758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1701060 
End bp1702466 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content61% 
IMG OID639702134 
Productglutamyl-tRNA synthetase 
Protein accessionYP_845492 
Protein GI116748805 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000255518 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCCG TAATCACTCG ATTCCCGCCA AGCCCAACCG GGGATCTGCA TATCGGAGGG 
GCAAGGACGG CCTTGTTCAA CTGGCTCTTC GCCCGCCATT TCGGCGGCAG ATTCATCCTT
CGCATTGAAG ACACGGACCT CGTCCGGTCG ACGGAATCGT CCATCAAGGC CATTCTCGAC
GCCATGGAAT GGCTCTCCCT GGACTGGGAC GAGGGACCGT ACTATCAAAC AAAGCGACTC
GATGTCTACA AGGATTACCT TCAAAGAATG GTCGACGGCG GTGCCGCCTA CTATTGCGAC
TGCGCGCCCG ACGATCTCGA ACGACGGCGC AAGAGCGCCA TGGCAGAGGG GCGAAAGCCC
AAGTACGACG GCAGGTGTCG GGATCGCGGG CTCGGTCCCG GGCCGGACAG AGTGCTCCGG
TTCCGGTGTC CGGATTCGGG CACGACGGTG CTCAACGATA TCATCAAGGG ACCGATTTTT
TTCGAGAACG CCGAGCTCGA CGACCTCGTC CTCCAGCGCA GCGACGGCAT GCCCACCTAC
AACTTCGCGG TGGTGGTGGA TGACGTCACC ATGAACATCA CCCACGTCAT TCGCGGGGAT
GACCATGTGA ACAACACCCC GCGCCAGATC CTCATCTACC AGGCTCTCGG TGCCAGGCTG
CCGTATTTCG CGCATGTTCC CATGATCCTG GGCGAGGATC GGGCGCGCCT GTCCAAGCGC
CACGGGGCCA CCTCGGTCAT GGCCTACCGG GACATGGGGA TCCTTCCGGA AGCGCTGATC
AACTACCTGG TCCGACTCGG ATGGTCTCAC GGAGACCAGG AGATCTTCAC CCGGCGGGAA
CTGATCGAAA CCTTCAGCCT GGAAAACGTC GGCAAATCCG CCAGTGTGTT CAACCCGGAG
AAGTTCTTGT GGCTGAACGC CCACTACCTG AGGGAAAGGA GCCCGGAGGC GCTGGTTCCC
CTTTTGCAGC CGTTCCTTGA CGCGAAGGGC TATCCTGCCC GGTCGCCCGA ATACGTGGCC
CGAGCGATTC CGACGCTGCA GCCCAGAGTG CGGACGCTGG TCGAGATGGC GGAGCAAATG
CGGTTCTACC TGGTGGATGA AGTGGAATAC GATCCGGAGG CGGCCCGAAA ATTTCTGGTT
TCCGCCATGC GCGAACCCTT CAATCGGCTT CTTGCGGAGC TGGCCGCACT GGACGGGTTT
TCCCACGAGC GCCTGGAATC GGTTTTTCAG CAGATCGTTT CGGAACTGGG ACTGAAGCTG
GGAAAGGTCG CCCAACCCGT TCGAGTGGCC TTGACGGGAG GGACGGTGAG CCCCGGCCTG
TTCGAGATCA TCGACGTTCT GGGCAAGGAC GCGGTGCTCA AGCGTCTGAA CAACGCATTG
CGGTTCATCG ACCGGCAGGC AGGCTGA
 
Protein sequence
MEPVITRFPP SPTGDLHIGG ARTALFNWLF ARHFGGRFIL RIEDTDLVRS TESSIKAILD 
AMEWLSLDWD EGPYYQTKRL DVYKDYLQRM VDGGAAYYCD CAPDDLERRR KSAMAEGRKP
KYDGRCRDRG LGPGPDRVLR FRCPDSGTTV LNDIIKGPIF FENAELDDLV LQRSDGMPTY
NFAVVVDDVT MNITHVIRGD DHVNNTPRQI LIYQALGARL PYFAHVPMIL GEDRARLSKR
HGATSVMAYR DMGILPEALI NYLVRLGWSH GDQEIFTRRE LIETFSLENV GKSASVFNPE
KFLWLNAHYL RERSPEALVP LLQPFLDAKG YPARSPEYVA RAIPTLQPRV RTLVEMAEQM
RFYLVDEVEY DPEAARKFLV SAMREPFNRL LAELAALDGF SHERLESVFQ QIVSELGLKL
GKVAQPVRVA LTGGTVSPGL FEIIDVLGKD AVLKRLNNAL RFIDRQAG