| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1366 |
|---|
| Symbol | |
|---|
| ID | 4460758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1701060 |
|---|
| End bp | 1702466 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639702134 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_845492 |
|---|
| Protein GI | 116748805 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000255518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCCG TAATCACTCG ATTCCCGCCA AGCCCAACCG GGGATCTGCA TATCGGAGGG
GCAAGGACGG CCTTGTTCAA CTGGCTCTTC GCCCGCCATT TCGGCGGCAG ATTCATCCTT
CGCATTGAAG ACACGGACCT CGTCCGGTCG ACGGAATCGT CCATCAAGGC CATTCTCGAC
GCCATGGAAT GGCTCTCCCT GGACTGGGAC GAGGGACCGT ACTATCAAAC AAAGCGACTC
GATGTCTACA AGGATTACCT TCAAAGAATG GTCGACGGCG GTGCCGCCTA CTATTGCGAC
TGCGCGCCCG ACGATCTCGA ACGACGGCGC AAGAGCGCCA TGGCAGAGGG GCGAAAGCCC
AAGTACGACG GCAGGTGTCG GGATCGCGGG CTCGGTCCCG GGCCGGACAG AGTGCTCCGG
TTCCGGTGTC CGGATTCGGG CACGACGGTG CTCAACGATA TCATCAAGGG ACCGATTTTT
TTCGAGAACG CCGAGCTCGA CGACCTCGTC CTCCAGCGCA GCGACGGCAT GCCCACCTAC
AACTTCGCGG TGGTGGTGGA TGACGTCACC ATGAACATCA CCCACGTCAT TCGCGGGGAT
GACCATGTGA ACAACACCCC GCGCCAGATC CTCATCTACC AGGCTCTCGG TGCCAGGCTG
CCGTATTTCG CGCATGTTCC CATGATCCTG GGCGAGGATC GGGCGCGCCT GTCCAAGCGC
CACGGGGCCA CCTCGGTCAT GGCCTACCGG GACATGGGGA TCCTTCCGGA AGCGCTGATC
AACTACCTGG TCCGACTCGG ATGGTCTCAC GGAGACCAGG AGATCTTCAC CCGGCGGGAA
CTGATCGAAA CCTTCAGCCT GGAAAACGTC GGCAAATCCG CCAGTGTGTT CAACCCGGAG
AAGTTCTTGT GGCTGAACGC CCACTACCTG AGGGAAAGGA GCCCGGAGGC GCTGGTTCCC
CTTTTGCAGC CGTTCCTTGA CGCGAAGGGC TATCCTGCCC GGTCGCCCGA ATACGTGGCC
CGAGCGATTC CGACGCTGCA GCCCAGAGTG CGGACGCTGG TCGAGATGGC GGAGCAAATG
CGGTTCTACC TGGTGGATGA AGTGGAATAC GATCCGGAGG CGGCCCGAAA ATTTCTGGTT
TCCGCCATGC GCGAACCCTT CAATCGGCTT CTTGCGGAGC TGGCCGCACT GGACGGGTTT
TCCCACGAGC GCCTGGAATC GGTTTTTCAG CAGATCGTTT CGGAACTGGG ACTGAAGCTG
GGAAAGGTCG CCCAACCCGT TCGAGTGGCC TTGACGGGAG GGACGGTGAG CCCCGGCCTG
TTCGAGATCA TCGACGTTCT GGGCAAGGAC GCGGTGCTCA AGCGTCTGAA CAACGCATTG
CGGTTCATCG ACCGGCAGGC AGGCTGA
|
|---|
| Protein sequence | MEPVITRFPP SPTGDLHIGG ARTALFNWLF ARHFGGRFIL RIEDTDLVRS TESSIKAILD
AMEWLSLDWD EGPYYQTKRL DVYKDYLQRM VDGGAAYYCD CAPDDLERRR KSAMAEGRKP
KYDGRCRDRG LGPGPDRVLR FRCPDSGTTV LNDIIKGPIF FENAELDDLV LQRSDGMPTY
NFAVVVDDVT MNITHVIRGD DHVNNTPRQI LIYQALGARL PYFAHVPMIL GEDRARLSKR
HGATSVMAYR DMGILPEALI NYLVRLGWSH GDQEIFTRRE LIETFSLENV GKSASVFNPE
KFLWLNAHYL RERSPEALVP LLQPFLDAKG YPARSPEYVA RAIPTLQPRV RTLVEMAEQM
RFYLVDEVEY DPEAARKFLV SAMREPFNRL LAELAALDGF SHERLESVFQ QIVSELGLKL
GKVAQPVRVA LTGGTVSPGL FEIIDVLGKD AVLKRLNNAL RFIDRQAG
|
|---|
| |