| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1349 |
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| Symbol | |
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| ID | 4460519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1672747 |
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| End bp | 1675293 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639702117 |
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| Product | CRISPR-associated Csm1 family protein |
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| Protein accession | YP_845475 |
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| Protein GI | 116748788 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1353] Predicted hydrolase of the HD superfamily (permuted catalytic motifs) |
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| TIGRFAM ID | [TIGR02578] CRISPR-associated protein, Csm1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATACA CGATGCACGA AGTGGTTGTT GGGGCTCTGC TCCATGACGT GGGCAAGTTC
CTTCAACGAG CGTATGACCG ACTATCGGAC GTCACTGGAC AGCATCTTGA TCTGGAATCA
ACGTTGTGCC CCCAGCAAAA AAGCGTTTAC ACTCACAAAC ACGTTCTCTT CACCAATGCT
TTTTTTGACC TCATGAGCAA AGAAGAGGTC TACTTTCCCG CGGGAATCAA TGCAAAGACC
GTTGAGGACA TTTCGAGCTA TCATCACAAA CCGGATGCTT GCCCCATCCC AGGTGCTTCG
TGGCTCTGCG CGCTGGGAGA TAGGTTGTCC GCAGGTATGG ATCGCCGCGA TGATGAAGAG
ACGAGCGAAC GGGCTTCGTC GCGAAGCACG TTTAAGAAAA CGCCGCTCCG TTGCATCTTC
GATGAGGTCA TCCTCGATCC GAAAGCCCTC GGAATGCCGC AAGCCCATGC ATACAGACTG
GGTGTGCTGA ATCCTGAGGA TGCGGAAAGC ATGATACCCA TAGCGTGGCC ATCGAAGGGT
GAGGTGCCGG AGCTTCCGAA ACGTTACCAA GAGGTGTGGC AACAATTCTG GGGTGAGATA
AAGGTGCTGG GACGAGAAGC ACCGAGGCTT TCCTTCGATC TTTTCGAGGA AGCGTTATTA
GGATTGCTCG AGCGCTACAC ATGGGCTATC CCGTCGAGCA CAGTGAATTC CCCTGACATC
TCCCTCTACG ACCACGCACG CACAACTGCG GCTATAGCCG CATGTCTCTA TCGTTACCAT
GATGCAAAAG GACAACTGGA AGACGTAAAG GCAATTAGAG ACGAGCAGCA AATGAAGTTT
CGTCTGCTTG CGGGAGACCT CTCGGGCATT CAAAATACCC TTTTTTCCCT TCAGACACAG
GGCGTCAAAG GAGTGAACAA GATATTAAGG GCTCGTTCAT TCATGATGAG TGGGGTCTCT
GAGGCTGCAG CCCTACTTTC TATCGAGTTG CTTTCTCTTC CCATTTGCAC AGTGCTGCAA
CAGGCTGGCG GCCGATTTCT CATTCTTGTG CCCGCACTCG GTGATACCGA AGATCATGTT
GACGGTCTGC GGGAACGGTT CGACAAGTGG CTTGTAGAAC ACTACACGGG GAGCCTGGCT
TTGAACCTTG TTCTCTCTCC GCCGTTTTCG GCATCCTCTT TTAAGCCCCA TCCATTGAGG
GAAATCATGG CAGGTTTGGG TCAGGCGATC GAAGACGGCA AGCAGCGCCC CCTTTCGAAG
TGTTCCCAAG GGGTACTGAA GCGCGAATAC CCTTTGGATG CACTCTGTTC CGCCTGCGGG
GTGCGACCGG CGGTCACAAC CGGTGCTGCC GAAAGTGGAT ACCGCTGCCT GACTTGTCAC
GATGAGTTTC GGATCGGGAG AGACCTTGTT GGTGCAACGG TTATGGTGTG GGGGCGTTCT
CTGCCGCGCG AATGGAATCC GGTTGACGTA ATAGGCCTCG AACTGGCTCT TCTTCGCAAT
CACCCGGAGA ATCTACCTGG AGAAGCTCTA TCCGTTCGCA GAACTTCGCC TCTTCACATG
CCGATCCCTT GGGCCGTGAG GAACCTAGCC AACCACATTC CGGTCTTTAA AGACCATTAT
GAAACGCAGG ATCCGCGCTA CGAGGGAAGC TGGGATGACG ATGTGGTTCC CAGGATCGGT
GAACCCAAAA GTTTCGCACA CATTGCAGCG GATGCTTTGG AACCGGAAAA GGATAGTGGG
GCATTTCGAG GCAAGGCGTT CCTGGCACTT CTCAAAGCAG ATGTCGACTA TTTGGGCTTT
CTCTTTAACT TCGGTTTGAA GCGTACGGAG GCTGAGGAAG ATCGATTTAC CCTGTCACGC
ATAGCCCAGC TTTCGCGAAT GGTGGACCTT TATTTCACCG GCTACCTGAA GGGTTTGCTT
CACAGGGAAT TCCCGGACAC TTACACTATC TATGCCGGAG GAGATGATCT GCTTTTCATT
GGCCCTTGGA GGCAGACTCT TGCTTTGACC TCACGAGTCA ATGAAACCTT CCGGGCATAC
ACGGGCCATA ACCCAAACAT TACCCTATCG GCAGGTGTAT CGTTGCTCAA GCCGAATTAT
CCTGTCAACC GGGCTGTTCT TGAAGCCCAG GAGTATCTCG ATGAATGCAA GTACCATGGA
CGCAACCGAG TCTGTGCTCT GCTGGAGAAA CCCGTTTCAT GGGAATGCTA CATAGCGCGG
CTGAAGGATG CCGAATGGGT TCATCAAAGA ATGCACGATG ATTCGCCTGT GAGCACGAGT
TTCATCTACC GGCTGCTTGT GATCGCCATG GATGCGGAGG CTGTTGCAAT CAAGGCCAAT
GTGCAAAAGG CCGGATGGCG TGCACGCCTT GCATATCATC TGGCCCGAAA CATCAAGGCT
CGCAACAACC AAGAGAAAGA AAAGATGATT GTTGAGTGGT TGGAGCATTT GGGGCTGGAC
GATCAACTCA AGTTGACTAC CAAGCATACC AATATCATAG ATTGGCGTCT GCCACTAACA
GTTGCCTTGT ATCGAAACCG AACTTAG
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| Protein sequence | MAYTMHEVVV GALLHDVGKF LQRAYDRLSD VTGQHLDLES TLCPQQKSVY THKHVLFTNA
FFDLMSKEEV YFPAGINAKT VEDISSYHHK PDACPIPGAS WLCALGDRLS AGMDRRDDEE
TSERASSRST FKKTPLRCIF DEVILDPKAL GMPQAHAYRL GVLNPEDAES MIPIAWPSKG
EVPELPKRYQ EVWQQFWGEI KVLGREAPRL SFDLFEEALL GLLERYTWAI PSSTVNSPDI
SLYDHARTTA AIAACLYRYH DAKGQLEDVK AIRDEQQMKF RLLAGDLSGI QNTLFSLQTQ
GVKGVNKILR ARSFMMSGVS EAAALLSIEL LSLPICTVLQ QAGGRFLILV PALGDTEDHV
DGLRERFDKW LVEHYTGSLA LNLVLSPPFS ASSFKPHPLR EIMAGLGQAI EDGKQRPLSK
CSQGVLKREY PLDALCSACG VRPAVTTGAA ESGYRCLTCH DEFRIGRDLV GATVMVWGRS
LPREWNPVDV IGLELALLRN HPENLPGEAL SVRRTSPLHM PIPWAVRNLA NHIPVFKDHY
ETQDPRYEGS WDDDVVPRIG EPKSFAHIAA DALEPEKDSG AFRGKAFLAL LKADVDYLGF
LFNFGLKRTE AEEDRFTLSR IAQLSRMVDL YFTGYLKGLL HREFPDTYTI YAGGDDLLFI
GPWRQTLALT SRVNETFRAY TGHNPNITLS AGVSLLKPNY PVNRAVLEAQ EYLDECKYHG
RNRVCALLEK PVSWECYIAR LKDAEWVHQR MHDDSPVSTS FIYRLLVIAM DAEAVAIKAN
VQKAGWRARL AYHLARNIKA RNNQEKEKMI VEWLEHLGLD DQLKLTTKHT NIIDWRLPLT
VALYRNRT
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