| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1337 |
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| Symbol | |
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| ID | 4460368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1657437 |
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| End bp | 1659905 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702105 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_845463 |
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| Protein GI | 116748776 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.121372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCGGC TCCGCCACGA CACCGAGAAG CGGGCCGATG CCCTCAGCTA CTTTTATTCC
GAGCGCAAGA ACGACATGCG GGACATCCGC GAAAGCCGGG CGATTTCCGT TTTCTTCCAG
AACCGGGCGC TCGGGATGTC CATGAAATAC GGCCTTGAAG CCAGCCTGCT CGGAATCCTG
GAAGAGCTCG AGCGGGTGCA AAGAGACCGG GCGCTCGGGA AAGACCCCAT CTACACGAGG
ATCGTCTTCC TGGACGATCA GGGCACGGTG CTGGTGGACA CCAGGCCCTC ACCCGAAGCG
GATTCGGCGG GTGCCTGGCA GAGGTTTCTC GCCCCCGGAT CGTCCGACGC CCTCATTCTT
AGCGAGATCA AGGATGACGC CCGGCAGGTG CTGATATCCG CCCCCTATTT CTTCAAGGGG
AAATATTCCG GCCAGATCGT CGCCGAGGTG TCGACCCAGG CCGTCCAGAC GCACCTCATC
AAGGCTGTCG GGGGCTATTC CAAGCGTGCC GTTTCAGTGA TCACGGGCGA GTGCAGCCGT
CCCCCGACGG CCGTTCCCGA CCCCGATTTC GTAACCGCGC GGCTTTCCGA CCTCAAGTCG
CTCCAGGATG CCGATTCGCC GGCGTTCGAC GAATTCTCCC GGGAAGAGCT GCACGAGGAA
TTCGTGATCA ACTGCGTCGA GGTCAAGAAC ACTCCCTTTT ACCTGGTCAA CATCTCTCCG
GTTTCCGAGC TTTTCGGCAC GGCCGCGCCG TGGCAGTTGC TCCTGGCCAT GGGGGCCTTG
TCGATCCTGG TCCTGGGCGG AACAGCCGTC GCATGGCACA TCAACGGCCG CAATCTTGTC
CTGCAGACGG GTCTGAAAGA GGCCGCCAGG AACAGGCTGG AGCTCGAAGG AAAGAACTTT
CAACTCGAAA GGGAAATCGC CGAGCGCAAG AAAGTGGAGG ATGCGCTGCG CGAGTCCGAG
GAGAAGTACC GGCTCGTTGT GGAAAACGCC AACGAAGCCA TCTTCATCAC CCAGGACGGA
GTCATCAAAT TCCCCAATCC CAAGACCCTC TCGCTCACCG GATTCACCAC GGACGAGCTG
ACCTCGGCCA ACCTCGCGGA GCTCCTTCAC AGCGAAGACC GGCAGACCGT CCTGCAGGAA
CACGCCAACA CGCTGGAATC AAACTCGACC AGCCGATACG CCTTCAGAGC GTTCAGAAAG
AACGGCGAGG AACTGTGGCT CGAAGCCAAC TCGGTGCCCA GCACCTGGGA GGAAAGACCG
GCCATCCTCA ACTTCATCCG GGACATCACT CTTCAGAAGA AGCTCCAGGC CCAGCTGTTC
CACGCTCACA AGATGGAAGC CATCGGCACG CTGGCCGGAG GGATCGCTCA TGATTTCAAC
AACCTGTTGC AGGTGATACA AGGCTATGCG GAAATGCTGT TGTTTGGAAA GGAGCAGGAC
GATCCGTTCC AGAAGGAGCT CGAGGAGATC TTTTTCGCCG CCAAGCGCGG TGGCGAGCTC
ACCCGGCAGT TGCTGACCTT CAGCCGGAGA ATCGAAAGCA AGCCCCGCCC CATTCATCTG
AACCGTCAAA TCGTGGAAAC CAGGAAGCTC CTGGAACGGA CCATCCCGAA GATGATCACC
ATCGAGCTGA ACCTGGCGAC CGATCTGCGC CCCGTCAATG CCGATCCCGC GCAGTTCGAA
CAGGTTCTGA TGAACCTGGC CGTCAACGCC CGGGACGCCA TGCCGGAGGG AGGGGTTCTC
ACCATCGAGA CCAGGAACGT CGTGCTCGAC GAGCTGTTCT GCATGGGACA AGTGGGAGTG
AGTCCCGGCG AATACGTGAT GCTCAGCGTA TCCGATAACG GTCACGGGAT CGACGCCGGG
ACCCTGGAGC ATATCTTCGA GCCCTTTTAC AGCACCAAAG GGGTAGGCAG GGGAACGGGG
CTCGGGCTGG CGATGGTCTA CGGGATCGTC CAGAGCCATG CGGGGTGCAT CCTGTGCTTC
AGCGAAGCCG GGAAAGGCAC CCGATTCGAC ATCTACCTGC CCCCGACCAA CGCGGCCGTG
CGCCCCGAGG AGAAGCGCTC GCCCCAGGAA TTGCGGGGCG GCACCGAAAC CGTGCTGCTG
ATCGAGGACG AAGCCTCCAT CAGGAATATC TGCAAGCAAA TGCTCGAACA ATTCGGCTAC
CGCGTCATGA TCGCCGTCGA CGGCGACAGC GGGCTGCGCG CCTTCAGGGA GCATTGGAAA
GACATGGACG TCGTTCTCCT CGACTTGATC ATGCCCGGCA TGGGCGGAAA GGAATGCCTC
AAGGAGTTGC TCAAGGTCAA CCCGGATGTT CCGGTCATTA TCGCCAGCGG ATATTCGCCG
GACGGCCAGA CGATCCAGAT GCTCGAAAAC GGGGCACGCG GATTCGTCCA CAAGCCCTAT
GAAATCCGGG AGCTGCTGAG GGTGATCCAG GGAGTGATGG CGGCCCCCAA AGGCATGGAG
GACGAATAG
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| Protein sequence | MERLRHDTEK RADALSYFYS ERKNDMRDIR ESRAISVFFQ NRALGMSMKY GLEASLLGIL
EELERVQRDR ALGKDPIYTR IVFLDDQGTV LVDTRPSPEA DSAGAWQRFL APGSSDALIL
SEIKDDARQV LISAPYFFKG KYSGQIVAEV STQAVQTHLI KAVGGYSKRA VSVITGECSR
PPTAVPDPDF VTARLSDLKS LQDADSPAFD EFSREELHEE FVINCVEVKN TPFYLVNISP
VSELFGTAAP WQLLLAMGAL SILVLGGTAV AWHINGRNLV LQTGLKEAAR NRLELEGKNF
QLEREIAERK KVEDALRESE EKYRLVVENA NEAIFITQDG VIKFPNPKTL SLTGFTTDEL
TSANLAELLH SEDRQTVLQE HANTLESNST SRYAFRAFRK NGEELWLEAN SVPSTWEERP
AILNFIRDIT LQKKLQAQLF HAHKMEAIGT LAGGIAHDFN NLLQVIQGYA EMLLFGKEQD
DPFQKELEEI FFAAKRGGEL TRQLLTFSRR IESKPRPIHL NRQIVETRKL LERTIPKMIT
IELNLATDLR PVNADPAQFE QVLMNLAVNA RDAMPEGGVL TIETRNVVLD ELFCMGQVGV
SPGEYVMLSV SDNGHGIDAG TLEHIFEPFY STKGVGRGTG LGLAMVYGIV QSHAGCILCF
SEAGKGTRFD IYLPPTNAAV RPEEKRSPQE LRGGTETVLL IEDEASIRNI CKQMLEQFGY
RVMIAVDGDS GLRAFREHWK DMDVVLLDLI MPGMGGKECL KELLKVNPDV PVIIASGYSP
DGQTIQMLEN GARGFVHKPY EIRELLRVIQ GVMAAPKGME DE
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