Gene Sfum_1326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1326 
Symbol 
ID4460357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1644407 
End bp1645804 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content70% 
IMG OID639702094 
Producthypothetical protein 
Protein accessionYP_845452 
Protein GI116748765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000243968 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00621187 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACTGCA CCCGCATCAT CGACTTGCTG CCGGAATACC TGGAAGGAAC GCTCGACGGT 
TCCGAGAAGA GCAGGGTTGA GGAGCATCTG GCCGGGTGCG AGGCGTGCAG CGCCGAGCTG
AAGCTGATCC AGCGCTACTT TCAGACGATG GCCGGCCTCG AGCGGCACGA AGCCCCGGCT
GATTTTCTCA GGAACGTGCA CGCGCGCATC GAGCGGGAGC CTTCCTGGAA AAGTCTGTTG
AGCCGACTTT TTCTGCCCCT GAAGATCAAG CTGCCGCTGG AGGCGTTGGG AGTCGCCGCC
GCCGCGCTGC TCATCTTCAC CTTCTATTAC AGTGCGCCGG AAACGAAGAT GGACCTCCCG
AGGGAATCCC CGGTGGCCCG GGCTCCCGCC ACCGCCGAGG CTCCGATGCC GCCCGGGACA
GTGGCGGGGC TTCCCGCTCC CGCCCAGCCT CCGAGCCGGG CGGCGACTTC GGTTCCAGCC
CCGGCCCCGA CGGAGATTCA TCCTCGGCCC AAAGCCGCGG CTCCGGCTCA GGATCGTTTT
GCCGCGCAGC CCTCCTTTCC GGAAGAGGAA CGCGGAGCGG GCCGGGCGAA ACCGGAGGCC
GAAGCGCCGG CCGGCGCCGT GGAAGCGGGC AGGGCGGGAC CCGTTGAGCG GGCGGCGACG
GGGATCCCCG CGCCGAAGCC TGAAGCCGGG CCGTCGAAGC GTGCCGACCG TTCCCAGGCA
ATTCTCCCGG CCCCTTCGGC GCCGGCGGTG CAGCGTCGGA TGTCCCCCCG GGTCGTCCAT
GACGAGCTGA CGCTCTCGGT TGAACTGCGT GCCGCCGTGG GCGGACAGGT ATCCGGAGCC
GTCGGCCGCG CGTCGCCGGG CGCGGCGGAA AGGGCGGATT CGGAAGTTTC GATGCGGGAA
GCATCGCCCG TGCCCCAGGC GGCTCCGACG CAGGAAGAAG CCCGAGGAGC CGGACGAGCG
GGAGCAGGAG TCGGGACATC CGAACCCGCG AAAGCGCCCG CATCTCCGGG AGCCGTCCCG
CGGGCCGGCA CTGCTCAGCC CCGCGCAAAA GCGGGCAAAC CCGCGAAGTC GCCGGCTGCC
GGGCCCCCGA GTGAGACGGT GTCTGGAACG CCCGAGGAGT TGCCGCGCTC CCTTTCGCAA
CCCGTCGATG CGGCCGCCGA AGTCTCCAAG GCGGTGCGTT CCTCCGGGGG CGTGGTACTG
GCCGAAGATT TCGACCGGAA GACCGGACTG CTGAAGACCA TTGTCGCTGA AATCCCGGCC
GAGGGCTACT CCGCCGTGGT TTCCGGCCTT GAGCGCATCG GGGCGGTCCG CAAACGTTCC
GGCCTCCCCC CGGGCGTCGG GCCTGGAGCG CGACTCCGGC TGCGAATCGA ATTCTCGACG
CCCCCGACCG CACGATGA
 
Protein sequence
MDCTRIIDLL PEYLEGTLDG SEKSRVEEHL AGCEACSAEL KLIQRYFQTM AGLERHEAPA 
DFLRNVHARI EREPSWKSLL SRLFLPLKIK LPLEALGVAA AALLIFTFYY SAPETKMDLP
RESPVARAPA TAEAPMPPGT VAGLPAPAQP PSRAATSVPA PAPTEIHPRP KAAAPAQDRF
AAQPSFPEEE RGAGRAKPEA EAPAGAVEAG RAGPVERAAT GIPAPKPEAG PSKRADRSQA
ILPAPSAPAV QRRMSPRVVH DELTLSVELR AAVGGQVSGA VGRASPGAAE RADSEVSMRE
ASPVPQAAPT QEEARGAGRA GAGVGTSEPA KAPASPGAVP RAGTAQPRAK AGKPAKSPAA
GPPSETVSGT PEELPRSLSQ PVDAAAEVSK AVRSSGGVVL AEDFDRKTGL LKTIVAEIPA
EGYSAVVSGL ERIGAVRKRS GLPPGVGPGA RLRLRIEFST PPTAR