| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1321 |
|---|
| Symbol | |
|---|
| ID | 4461122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1634412 |
|---|
| End bp | 1635998 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639702089 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_845447 |
|---|
| Protein GI | 116748760 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00204071 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000165745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTAA TCCGACCAGA AGTGAGGATG TACGCCGCCT TTGCCAGGCT GAACTATAAG
CCGTGGTATG CTCTCGCCGA GTTTGTCGAC AATTCGCTAC AGAGCGCACT GTCAAACATG
GATAGGCTTC GAGTAGTCTC TCAAGGACCG TATAGGCTAC AGGTTGACAT CGACATTGGG
ACTGACAGCA TTGAGGTGCG GGATAATGCA GCTGGAATTC ACGAACATGA GTACGCACGT
GCATTCTTGC CTGCCTCCCC TCCCGCTGAT ACCTCCGGCT TGTCTGAGTT TGGGCTAGGC
TTGAAGGCGG CTGCAAGCTG GTTTGCCCGC CAGTGGTCAG TTCGCACGAG TTCACTAGGC
GAGCCGATTG AACGAACGAT CACGTTCGAC ATCCCCAAAA TTGTCGAGAC GAATTCCGAG
CATTTGGAGC CGGTCGAAAG GACCGTTTGT GCCAACGACC ATTTTACAAC AGTATCTCTT
CGAGACCTCC AAGTGCGACT GCGTGGACGG ACTATCGGAA AAATCAAGGA CCATCTGCAA
AGCATTTACA GAGTTTTCTT GCGCGATGGA CTTTTGGAGC TGCGGCTAAA TGGAGAGACT
CTCGCATATG ATCCTCCTAC ATTTCTTCAG GCACCTTTCT ATGCGACGCC GACGAACGAA
CCTGTGACAT GGCGTAAGGA AATCGAACTT GATTTGGGCG ATGGGCATCG GGTAAGAGGC
TGGGCAGCGA TTCTTGCGCG GGCTAGCGTG GCAAACGCTG GATTTGCGAT GTTCCGTCGT
CGCAGACTCA TTCAAGGCAG CCACGGCGAC GGATATCGGC CGGAGGTAAT CTTTGGAAAA
CCGAATAAGT TTATCTACCA GCGACTCATC GGCGAGTTCG AGATAGAAGG CTTCTCAGTC
AGCCATACGA AGGATGGGAT TCAATGGGAG GACTGGGAGG AGGACATTCT CAATTGGCTA
AAGGAGAAAC TGGATGACGA ACCTCTGCCA CTGCTCGACC AAGCTGCAAA CTACCGTGCA
AGGGCAAGCA TTATCCAGGA TATGGTGCAG GAAGCCACCT GGGATACCAG GCAGGCAATT
GCCCAACACC TGCCCCCCAT CATCGACGAG CAGATCAATG CGGCGCCAAA TGAAGCGCCT
CTACCCCGAG CGCTCGACGA GTTAGAAAGC GAGCTTGCCC GAAGCGAGCA AGTCGAACTC
CATCTTGATC ACGCGCATCG TCATTGGGTC ATAAACGTCG AGCTTATGTC TGATATCAGC
CGAGAAGCCT GGTTTGAGAT AGCTGAAAAT GTGACAGACA GCGACAGCAC AAGGATTCAC
ATACGAGTGA ATCTAGCTCA CCCGTTTATG GTGCGATTCA TTTCCCCGGA TGCAGATGAA
CTTGTTCCTT TCACACGGTT GGCTGCCGGG CTTGCCATCG CGGAAATAAC CGCCCGAGAA
GTAGGTGTCA GACAGGCGGG AACACTGCGC ATGAATTTTA ACCAGATTTT GCGTTCAGCC
CTCTCTGGAC CCATTCAACG AGGAGAAATT CGCCATGCCG AACAACGGCA ACCATCTGAT
CCAGATAATC GAATCGCATC CAGATGA
|
|---|
| Protein sequence | MILIRPEVRM YAAFARLNYK PWYALAEFVD NSLQSALSNM DRLRVVSQGP YRLQVDIDIG
TDSIEVRDNA AGIHEHEYAR AFLPASPPAD TSGLSEFGLG LKAAASWFAR QWSVRTSSLG
EPIERTITFD IPKIVETNSE HLEPVERTVC ANDHFTTVSL RDLQVRLRGR TIGKIKDHLQ
SIYRVFLRDG LLELRLNGET LAYDPPTFLQ APFYATPTNE PVTWRKEIEL DLGDGHRVRG
WAAILARASV ANAGFAMFRR RRLIQGSHGD GYRPEVIFGK PNKFIYQRLI GEFEIEGFSV
SHTKDGIQWE DWEEDILNWL KEKLDDEPLP LLDQAANYRA RASIIQDMVQ EATWDTRQAI
AQHLPPIIDE QINAAPNEAP LPRALDELES ELARSEQVEL HLDHAHRHWV INVELMSDIS
REAWFEIAEN VTDSDSTRIH IRVNLAHPFM VRFISPDADE LVPFTRLAAG LAIAEITARE
VGVRQAGTLR MNFNQILRSA LSGPIQRGEI RHAEQRQPSD PDNRIASR
|
|---|
| |