Gene Sfum_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1316 
Symbol 
ID4461117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1625775 
End bp1626815 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content63% 
IMG OID639702085 
Producthypothetical protein 
Protein accessionYP_845443 
Protein GI116748756 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.150193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000189083 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCTGT ATAAGACCAT GGTCAAGCTG TTGGAGGCGA ACACTCCATT CGCCCTCGCC 
ACGATCGTCT CCCGGTCCGG CTCGGCCCCG CGCGCCCCCG GCACCCGAAT GATCGTCCTT
GCGGACGGTG CCGTCGAGGG AAGCGTCGGA GGCGGGATCC TGGAAGCCGG AGTTCTGGAG
TTGGCCGGAG ACTGTTTCGA ACATGGCAAA GCGCGAATCG GGACGTTCAA CCTCACCTCC
GCCGACGCCC GCGAGATGGG TATGACCTGC GGCGGTCGGG TCCGCGTGCT CGTCCAGCTC
ATCCACCCGG CCGAGGCTCG TCACCTGGAG CTGTTCCGGG CGGTGCGGTC CACTCTCGAG
AACAGAAGGC AGGCTTGGCT GATTTTTGAA GTCCCAACGG AAGACAAGAA CGCGGACCCC
GTGGGAATGG GATTATGTCC CACGGATGGC CCATGCGTTG GAAATCTCGA TGAAGAGACC
CTGCGAAAGG TCGTCCTTCT GGCCGGCACG GGCCCGCCTC AATCGGTCTG CTGCGAAGGG
CGCAGCTATC TCGTCGAGCC CTTGTGCCAC GAGGCCGTCG TCTTCATTTT CGGGGCCGGG
CACATTTCAC GGCAACTGGC TCCCCTGGCA AAGCGTGTGG GGTTTCACAC CGTCGTGCTG
GACGACCGTG AGGAATTCGC CAACCGGGAG CGGTTCCCCG ACGCCGACCG GATCGTCGTG
CCGACCGGCT TCGATTCCGT CATCCCGCAG CTGGACATCG ACGAGAACAG CTACCTGGTG
CTGGTGACCC GTGGGCACCA CTACGACGGC ATGCTCCTCG GCGAGGCATT GAGAACCAAA
GCCGGCTACA TCGGCATGAT CGGCAGCAGG CGGAAGCGGG ATGCGATCTA TGCCGAGCTG
GCTCGAAAGG GCTTCACATC GAGCGATTTC CAGAGAGTCC ATTCCCCAAT CGGGTTGAAT
ATCGGCGCCG AGACCCCCGA GGAAATCGCG GTGAGCATCG TGGCCGAGCT GATTCAGGTC
CGGGCGGGGA AGAACGGATG A
 
Protein sequence
MNLYKTMVKL LEANTPFALA TIVSRSGSAP RAPGTRMIVL ADGAVEGSVG GGILEAGVLE 
LAGDCFEHGK ARIGTFNLTS ADAREMGMTC GGRVRVLVQL IHPAEARHLE LFRAVRSTLE
NRRQAWLIFE VPTEDKNADP VGMGLCPTDG PCVGNLDEET LRKVVLLAGT GPPQSVCCEG
RSYLVEPLCH EAVVFIFGAG HISRQLAPLA KRVGFHTVVL DDREEFANRE RFPDADRIVV
PTGFDSVIPQ LDIDENSYLV LVTRGHHYDG MLLGEALRTK AGYIGMIGSR RKRDAIYAEL
ARKGFTSSDF QRVHSPIGLN IGAETPEEIA VSIVAELIQV RAGKNG