Gene Sfum_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1315 
Symbol 
ID4461116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1624450 
End bp1625778 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content63% 
IMG OID639702084 
Producthypothetical protein 
Protein accessionYP_845442 
Protein GI116748755 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.437061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000203578 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATCA CTCCCCTGCA GGACTGGATC GCGGCAAGAA TGGGAACGCA CGGGCATCGC 
CTGTCCAGGG CCGATGTCGA GCGCCGCCAA CTGCTGGGGC TGCGTGAAAC CGTGCGCCGC
GCGTCGGCGG AAAGCCGCTT CTACTCCGCG CATCTGGGGC AGCTGTCGGA GGCCGACATC
CACTCCCTGG ATGACTTGCA CCGTTTCCCT TTCACGACCG CGCGGGACCT CAGACGGAAT
CCCTATTCAT TTCTGTGCGT TTCTCAGGGT AATATCAGTC GCGTGGTGAC GCTCGGGACT
TCCGGCACCA GCGGAGAACC CAAGCGCGTT TTTTTCACCT CTGAAGACCT CGAATCGACC
ATCGACTTCT TTCGGCAGGG AATGTCCATC CTCGCGAAGC GAGGCGACCG GGTGCTCATC
CTGTTGCCGG GCGAGCGTCC CGGGAGTGTC GGGGATTTGC TGCGCGAAGC GCTGCGGCGC
ATCGGAGCGC AGGGAATCGT TCATGATCCG GTCAATGACG TCCCGGGCAC CCTGAAGAGG
ATGGCCCGGG AACACATCGG AGTGCTTGTG GGAGCGCCCG CGCAGGTGCT GTCCCTGGCA
CGGCAAAGTG ATGGGAAGTC GGCCCCGAGG AGCATTCTGC TCAGCACCGA CCATGTCCCG
GCAGCGATTG TCGAGGCCCT CCGGCACATA TGGAATTGTG AGGTCTTTAC CCATTATGGT
ATGACCGAGA TGGGCTACGG AGGCGGTGTG GAATGTGGCG CCCATCGTGG CTATCATATG
CGGGAAGCCG ACCTCTGCTT TGAAATCGTG CACCCGGAAA CCGGGCGACC GGAGCCGGAC
GGAGTGATGG GAGAAGTGGT GTTCACGACG CTGACCCGCG TGGGGATGCC CCTGATAAGA
TATCGCACGG GAGACCTGGG CAGGTTCCTG CCGGATGCCT GTCCCTGCGG TACCGTCCTG
AAGACCATGG ACCGGATCGA AGGCCGCATC GACGGCCGGG TGCCCATCGC CGGCGGATCG
GTGCTCACGA TCGCGGAACT GGACGAGGCG CTTTTCCCGA TGGACGATCT CCTTGATTTC
GAGGCCTCAA TCAGCCGCGG GGGCAATAGG GACTTGCTGC GCATCGAGCT GAGCCTAAGA
GACGCCGGCA AACGGGGAGC TCGGGACCGG GCGCTGGATG CCCTGCGAAC CGTCCCGGCA
ATTCGTTCGG CAGAGCTTCG AGGCGATCTC CTCGTGACCC TGGCCCTGCG TGCCCCCGCG
TTGCCGGCGA CCGGAAGCAC CGCCAAGCGA ACTCTTGTCG ACAATCGCAA CCCGGAGCGT
GTTTCATGA
 
Protein sequence
MKITPLQDWI AARMGTHGHR LSRADVERRQ LLGLRETVRR ASAESRFYSA HLGQLSEADI 
HSLDDLHRFP FTTARDLRRN PYSFLCVSQG NISRVVTLGT SGTSGEPKRV FFTSEDLEST
IDFFRQGMSI LAKRGDRVLI LLPGERPGSV GDLLREALRR IGAQGIVHDP VNDVPGTLKR
MAREHIGVLV GAPAQVLSLA RQSDGKSAPR SILLSTDHVP AAIVEALRHI WNCEVFTHYG
MTEMGYGGGV ECGAHRGYHM READLCFEIV HPETGRPEPD GVMGEVVFTT LTRVGMPLIR
YRTGDLGRFL PDACPCGTVL KTMDRIEGRI DGRVPIAGGS VLTIAELDEA LFPMDDLLDF
EASISRGGNR DLLRIELSLR DAGKRGARDR ALDALRTVPA IRSAELRGDL LVTLALRAPA
LPATGSTAKR TLVDNRNPER VS