Gene Sfum_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1312 
Symbol 
ID4461113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1621660 
End bp1622571 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content65% 
IMG OID639702081 
Productmethyltransferase type 11 
Protein accessionYP_845439 
Protein GI116748752 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.117711 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0001856 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTCGTA TCTCGGCAGC TCATTTCCGG TGGACCTGCT CAAATGCCCG CGTTGCGGCC 
TTGTCTTCGT CCCCGAGGAG CTCGCTCTGG GCAGGATGGC CGAAGTGGAG AGACTCCTTG
AAGACAAGTG ATCCCGCTTG CCTGGCTCCC GGACCGCCGA CAGGGCACGC GGGGCTCCTG
TATGAGAGGC TCGCAGCGAG TGGAGCGGCG GCGGACGCGA TCCGCCCCGG AGGTCTGCCG
TTGACGGAAC GCGCTCTGAC ACTGTGCCCG TTCCCCCCGG GGTCCCGGTT GCTGGACGTC
GGATGCGGCG TCGGCACCAC CGTCCGATAC CTGACCGACC GCCACGGACA CCGGGCGGCC
GGCATCGACC CTTCCGCGCT CATGATCGAG ACGGGACGCA GGCGATACCC CGGTCTGTGG
CTGATGAGAG CCCGGGGAGA AGCCTTGCCC TTCGCCGATG ACGTCCTGGA CGGCGTCCTG
GCCGAGTGCA GCCTTTCCGT GACGCGCGCT GCGGACCGTG TTGTACGCGA GATTCATCGC
ACCCTCACCC CGGGGGGAAA ACTCCTCATG AGCGATGTGT ACGCACGCAA TCCCGAATTC
CTGCCGGAGC TGCGCCGGAT TGGCCTGAGC GGCTGCCTCG GCGGAATCAA GTCCATGGAG
GAGCTGGCTT TCAGCCTTGG CGCTTCCGGT TTCGAGATCC TCCACTGGGA GGATCACTCA
GCGGAACTCA AGCTGTTTGC GGCGCGGCTC ATCCTCTCCG GCGGTTTCGC GGCCGATTTC
CGGTGCCTGT GGGGAGAATG CGGCGGCGAG GGCCGGAACC CCGAAAAAAC GCGGCAGGCC
GTCTCCAGGG TCAGACCCGG ATACTTTTTG CTCATTGCCG GAAAAAGAAT GAAGAAGGCC
GCCGGATTCT GA
 
Protein sequence
MSRISAAHFR WTCSNARVAA LSSSPRSSLW AGWPKWRDSL KTSDPACLAP GPPTGHAGLL 
YERLAASGAA ADAIRPGGLP LTERALTLCP FPPGSRLLDV GCGVGTTVRY LTDRHGHRAA
GIDPSALMIE TGRRRYPGLW LMRARGEALP FADDVLDGVL AECSLSVTRA ADRVVREIHR
TLTPGGKLLM SDVYARNPEF LPELRRIGLS GCLGGIKSME ELAFSLGASG FEILHWEDHS
AELKLFAARL ILSGGFAADF RCLWGECGGE GRNPEKTRQA VSRVRPGYFL LIAGKRMKKA
AGF