Gene Sfum_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1308 
Symbol 
ID4461109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1612994 
End bp1614238 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content59% 
IMG OID639702077 
Producthypothetical protein 
Protein accessionYP_845435 
Protein GI116748748 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.224872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0430499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTC GGCTTGCTCA GAGTCTGTGC ATTCTGATCG TCGTCTCGCT GCTCCCGTTG 
TGTTCGTTTC AGGGGGCCGG CGACACGGCG CGGGCGGAAA CCGCTCCGAG TGCTTCGTCC
GTCATCATCA ATCACAATCA CACGAACCTC GCCGTAGTCC CCACCTACTG GATCACCCAG
GCAAAGAAGA ATCTGCGCCT GGGCTACGGC CACACATCCC ACGGAAGCCA ACTGGTGAGC
GGGATCGAGG CTTTCCGGGG CGAGCCCGGT TCCGCGTACT ATTACAGCTA CACGGGCTCA
GGGCTGCACC GGGGGGTTTT TTTCAACGAC TACTGGGCTG GTGAAGACCT CGGGCACAAC
GGGGATCTGG CATGGAGGGA TGCGACCGTC GATATGCTCG ATCTTCCCGC CAATGACCGG
AACGTGGTGA TGTGGTCGTG GTGCGGAGGC GTCTCCGACA ATACCCCAGG CGGCATTAAC
ACTTATCTCA ACGCCTTGGC GGCGCTTGAA AGCGCCTATC CGGGAGTGCG GTTCATTTAC
ATGACGGGCC ACCTGGACGG ATCGGGTGCG GCGGGCAATC TCCACAAGCG AAATCAGCAG
ATCCGAAATT TTTGCACGTT GAATAAAAAA GTTTTGTTTG ATTTTGCGGA TATTGAGAGT
TTCAATCCCA CCTCGGATAC GAACTTCATG GTTTTGTTCG CCAATGACAA CTGCGACTAC
GACAGCAACG GCGACGAGAT CCCGGACCGC AACTGGGCAC AAGCCTGGAT CGCACACCAC
CCGGACTCGG AGCTCGCGCG AATCGCCGCC GACTGCGGCG ACTGCGCCCA TTCTCAGACC
TTGAACTGCG TGCTGAAAGG ACGGGCATTC TGGTGGATGA TGGCCAGGCT CGCCGGTTGG
GATGGTATTC CAGTTCCAAC GTTCACCATC AGGGCTGTCG TCCCCGTGGC TCACGAACAA
CCGAGGGCCG CGGGACGGTT CAAAATCACC AGGACCGGCC CTTCCAACCG GGCCGTGACC
GTGAGATACA CGGTCGGCGG CACCGCCACA CCCGGGGACG ATTACACAAC GCTCAGCGGC
TCGGTCAGGC TCGCGGCTGG AGTCAAGTCC GCGACTTTGA CGGTGATTCC CGTCTCAGAC
GGTATCGCCG ATTCCAACGA GACCGTTATA GTGAACCTTT CCGCGAATCG GTACTACAAC
CGGGGGGCGC GGTCGAAAGC CACGGTCACC ATCACGGATC ACTAA
 
Protein sequence
MNVRLAQSLC ILIVVSLLPL CSFQGAGDTA RAETAPSASS VIINHNHTNL AVVPTYWITQ 
AKKNLRLGYG HTSHGSQLVS GIEAFRGEPG SAYYYSYTGS GLHRGVFFND YWAGEDLGHN
GDLAWRDATV DMLDLPANDR NVVMWSWCGG VSDNTPGGIN TYLNALAALE SAYPGVRFIY
MTGHLDGSGA AGNLHKRNQQ IRNFCTLNKK VLFDFADIES FNPTSDTNFM VLFANDNCDY
DSNGDEIPDR NWAQAWIAHH PDSELARIAA DCGDCAHSQT LNCVLKGRAF WWMMARLAGW
DGIPVPTFTI RAVVPVAHEQ PRAAGRFKIT RTGPSNRAVT VRYTVGGTAT PGDDYTTLSG
SVRLAAGVKS ATLTVIPVSD GIADSNETVI VNLSANRYYN RGARSKATVT ITDH