| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1295 |
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| Symbol | |
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| ID | 4461131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1596107 |
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| End bp | 1598722 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702064 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_845422 |
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| Protein GI | 116748735 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1449] Alpha-amylase/alpha-mannosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0701988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAC CGCCTTTTTT TGAAAAAAAA GATCCGATGA TGAGAGACCC CTCCGAGATC
AAGCACGTGT GCATTCACGG CCATTTTTAT CAGCCGCCCC GCGAAAACCC CTGGCTGGAG
GAGATCGAAC GGGAAGACAG CGCGGCCCCG CACCACGATT GGAACGAACG GATCAACGCG
GAATGCTACC GCGCCAACGC CGCCGCGCGC GTGGTGGACG AAAAGAACCG CATCCTGAAC
CTGTACAACA ATTACGGCCG CCTCAACTTC AACTTCGGAC CGACACTGCT CAACTGGCTC
GAAAACCACG ATCCGTGGGT CTACCGGACC ATTCTCGATG CCGACCGCGA GAGTGCGGCA
CGGTTCGGCG GACACGGCAA TGCCATCGCC CAGGCATACA ATCATATCAT CATGCCCCTG
GCCAATCGTC GCGACAAGCT CACCCAGGTA TTGTGGGGAA TTCGCGACTT CAGCCGGCGC
TTCGGCCGCC ATCCGGAGGG AATGTGGCTG CCGGAAACGG CGGTTGACCG CGAGACTTTG
GCAATAATGG CGGATGCCGG CATCAAATTC ACTATTCTGT CACCTTCCCA GGCGGCGCGA
TGGCGCTTCA TCGGAAGCGG GTCCGACTGG ACGGATGCCT CAAACGGAAA GATACCGACC
GGTCGCGCTT ACCGATGCCT GTGCGGCCGC GGGAAACACA TCCATCTGTT CTTTTTCGAC
GCCGCCATTT CCCGTGGAAT CGCTTTCGAA CAACTGCTCG GGCACAGCAG CAGCCTTCTT
TCGAGAATGG ATGCCGCGTT CGCGGATCGC GACCGGAAAC CCGGTGAGCC ATGGCTCGTG
CATACCGCCA CCGACGGAGA ATCCTACGGA CATCATTTCA AGTTCGGGGA CATGGCCCTG
GCCGCGGCCT TCGAAAAAAT GGACCAGGAC CCCTCTACCC GAATCGTGAA CTATGCGACC
TTCCTCGCCT CATTTCCGGT GACGGCCGAA GTGGAGATCG TCGAAAACAC CGCCTGGAGC
TGCGCTCATG GGGTGGGCAG ATGGGAGCGG GACTGCGGTT GTCACATCGG GGGCGGACCG
GGATGGCATC AGCGGTGGCG CGGGCCGCTT CGGAAGGCCC TGGATCAGCT GCGCGACACG
CTGGCACGGC ATTACGAGCA CCAGATGCAG CCCCTCTGCC CGGATCCGTG GAAGGCCCGT
GATGAATACA TCGACGCATA TCTCGACCAG GAACATCTCC TGGAGGCGTT CATCGAGCGC
CACATGCGCC TCAGCTCGGA CTTCAGCTCC ATCCACCGCT TTCTGCGGCT CCTGGAGATG
CAGCGTCACG CCATGTTCAT GTACACCTCC TGCGGATGGT TCTTTGACGA CATCAGCGGC
CTGGAATCGT TATTGATTCT GCGTCATGCC GCGCGCGCCA TCCACCTGGC GGAAGAAACC
GGAGCCGCGT CCCCGGAGGC CGCGTTTCTG CACACGCTCG AACAGGCCCA CAGCAACCTG
CCCGAGCACG GGAACGGGGC GGACATCTAC TTGAACACCG TCAAGCCCGG CATCCTCCGG
AAGGATCGCA TCGCCGCAAA CTACGCCATC CAGTCGTTGG CCGGATCGTC CCGGCGGCGA
TTCAGCTTTT TCGGCTGCGA CGTCCTGCCG CAGCAGGAGG AAGACCTGGG CCGCAGCCCC
GTTCCCTGTC GCTTCGGCCA TGTAAAGATC AAGGCGGGCC GAACGTTGGA AGAGGAGGAT
TTTCTTTACG CGGTCCTGCA TTTCGGAGGC CTGGATTTCC GATGCTCGGT GAAGCGGTAC
GAAGACGACT CCGAATTCAA ATCGATTCTG AAAGCCTTGC AGCAGGCGGT CGAAGGACAT
CATACGGTCC TTATGGTGCG CATCCTCGAC GAGCGGTTCG GAGCGGATTA TTACAGTCTG
CACGATGTTT CCAGAGACTT GAGGACGTCC ATCGCACTCC AGGTAAGCCG CAAGACCTTT
GCTTCCTTTG TCGAACTGCA GCGCACCCTG TACCAGGCCC ATCAACCCCT GCTGACTTCG
CTCCGACAGT GGGGCATCAG GATACCCGCC GATTTGCGGG TCGCCGTGAG GCGGGTGCTC
ACCGATGAAG TCAAGGATCT CATCCGGGAC ATCATCAAGG CCGAAAACGA TGCGAGCCGC
GAAGAATACG ACTGGCAAGC CACCGACTTC AGCTTCCGGG CGCATGTCAG CCATCTCCAG
TCGCTCATCC AGGACGCGAA GTCGTGGGGG ACGGCGCTGC AACTGGAAGC CGCATCGATC
GATCTGGGCG GCGCCCTCGT CGAGGCCTTC GAGCAACTCG ACAGGCGTCC GTCTTCCCGT
GCGGCGGGGA GAGCGGTGCG GCTGCTGGAC GTGTGCCGGG TGCTGGGAGT GACCCCCGAG
TTGTGGAAGC TGCAAACGTT GTACTTCGGT ATGGTTCGCC GGGGGCTGAC CGATCCCGAT
TGGTTCGCGG AGCTTTTGAA CGCCAGGAAA TTTTGCGGTG GGCTTGACAA GAGGCTCGGG
TGCCGTTTCG GGGAATTCCT CGACGCGCTT CCCGAGTCGC TCTCCCGGGA CATCGTCCCG
CTCGTGAGCA CAAAGGCGGT GTCGAGAGTA CCCTGA
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| Protein sequence | MSAPPFFEKK DPMMRDPSEI KHVCIHGHFY QPPRENPWLE EIEREDSAAP HHDWNERINA
ECYRANAAAR VVDEKNRILN LYNNYGRLNF NFGPTLLNWL ENHDPWVYRT ILDADRESAA
RFGGHGNAIA QAYNHIIMPL ANRRDKLTQV LWGIRDFSRR FGRHPEGMWL PETAVDRETL
AIMADAGIKF TILSPSQAAR WRFIGSGSDW TDASNGKIPT GRAYRCLCGR GKHIHLFFFD
AAISRGIAFE QLLGHSSSLL SRMDAAFADR DRKPGEPWLV HTATDGESYG HHFKFGDMAL
AAAFEKMDQD PSTRIVNYAT FLASFPVTAE VEIVENTAWS CAHGVGRWER DCGCHIGGGP
GWHQRWRGPL RKALDQLRDT LARHYEHQMQ PLCPDPWKAR DEYIDAYLDQ EHLLEAFIER
HMRLSSDFSS IHRFLRLLEM QRHAMFMYTS CGWFFDDISG LESLLILRHA ARAIHLAEET
GAASPEAAFL HTLEQAHSNL PEHGNGADIY LNTVKPGILR KDRIAANYAI QSLAGSSRRR
FSFFGCDVLP QQEEDLGRSP VPCRFGHVKI KAGRTLEEED FLYAVLHFGG LDFRCSVKRY
EDDSEFKSIL KALQQAVEGH HTVLMVRILD ERFGADYYSL HDVSRDLRTS IALQVSRKTF
ASFVELQRTL YQAHQPLLTS LRQWGIRIPA DLRVAVRRVL TDEVKDLIRD IIKAENDASR
EEYDWQATDF SFRAHVSHLQ SLIQDAKSWG TALQLEAASI DLGGALVEAF EQLDRRPSSR
AAGRAVRLLD VCRVLGVTPE LWKLQTLYFG MVRRGLTDPD WFAELLNARK FCGGLDKRLG
CRFGEFLDAL PESLSRDIVP LVSTKAVSRV P
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