Gene Sfum_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1290 
Symbol 
ID4461126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1591993 
End bp1592934 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content60% 
IMG OID639702059 
ProductUspA domain-containing protein 
Protein accessionYP_845417 
Protein GI116748730 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.85216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGGA ACGGAAAGAG CATCCTGTTG GCGTTGGATG GGTCGAAGCA GGCGTTGGAA 
ATGGTCAGGT ATGCGGCGCG GTGCCTGCCG CGCGAGAATG AAATGGTGCT GTTTCATGTG
ATGAGCAAAG TGCCCGAACC GTTGCGCGAC CTCGGATTCG ATCCCGGATG GCACGGTGAG
GACAAAGGCC TTGCGGAGTG GGAGAAACAG CAGGAAGAGA CCATCGAGGA ATTCATGGAA
ACCGGGCGTC GAGCTTTACT GAGCGCGGGT TTTGCATCGA GTGCGGTCAA GATCAAAGTC
AGCGAGCTCA AAGAAGGCTT CGCGCGGGAT ATCGCCGCGG AAGCCGTGAA CGGGTATGAG
GCGGTCGTGC TCGGACGCAG GGGCCTGAAC CCTCTCCAGA ACGCTGTTTT GGGAAGCATC
GCGTCCAAGC TTGCCGTCAA GCTGTGTAAA ATACCCGTGT GGCTGGTGGG CGGCAGACCC
GCGAGGGGAA AGGTGCTGAT TGCCGTGGAT CGCTCGGACA GTGCCATGCA GGCTGTGGAT
CACGTGGGGA AGGTGCTCGG TGGAACGGGC ACTGCGATCG AGCTTGTTCA CGTCGTCAGA
GGACTGGACG GCACGCTGGC AGGATACCAG AAGGTCTTCA TGGGTGAATA CATGCAAAGG
CTGACCCGGG AGGCCGAGGA GCGGATCCGG CCCACTTTCG AGGAAGCGAT CGACCATTTG
GAGGCCTTCG GGATTTCGGC GGGCAGAGTG ACCACCAAAG TCATCAACGG AGTGAAAAGC
CGTGCCGGCG CAATTCTAGA GGAAGCGGAA ACCGGGGACT TCGGAACGAT CGTGGCGGGC
CGGAGAGGGT TGACCCGGAC GGAGAATTAC GACATGGGCA GAGTGATCGC CAAGCTCCTC
CAAATGGCCC GGCGTCAGGC CGTCTGGATC GTGGGATGCT AG
 
Protein sequence
MSRNGKSILL ALDGSKQALE MVRYAARCLP RENEMVLFHV MSKVPEPLRD LGFDPGWHGE 
DKGLAEWEKQ QEETIEEFME TGRRALLSAG FASSAVKIKV SELKEGFARD IAAEAVNGYE
AVVLGRRGLN PLQNAVLGSI ASKLAVKLCK IPVWLVGGRP ARGKVLIAVD RSDSAMQAVD
HVGKVLGGTG TAIELVHVVR GLDGTLAGYQ KVFMGEYMQR LTREAEERIR PTFEEAIDHL
EAFGISAGRV TTKVINGVKS RAGAILEEAE TGDFGTIVAG RRGLTRTENY DMGRVIAKLL
QMARRQAVWI VGC