Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1290 |
Symbol | |
ID | 4461126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1591993 |
End bp | 1592934 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639702059 |
Product | UspA domain-containing protein |
Protein accession | YP_845417 |
Protein GI | 116748730 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.85216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGGA ACGGAAAGAG CATCCTGTTG GCGTTGGATG GGTCGAAGCA GGCGTTGGAA ATGGTCAGGT ATGCGGCGCG GTGCCTGCCG CGCGAGAATG AAATGGTGCT GTTTCATGTG ATGAGCAAAG TGCCCGAACC GTTGCGCGAC CTCGGATTCG ATCCCGGATG GCACGGTGAG GACAAAGGCC TTGCGGAGTG GGAGAAACAG CAGGAAGAGA CCATCGAGGA ATTCATGGAA ACCGGGCGTC GAGCTTTACT GAGCGCGGGT TTTGCATCGA GTGCGGTCAA GATCAAAGTC AGCGAGCTCA AAGAAGGCTT CGCGCGGGAT ATCGCCGCGG AAGCCGTGAA CGGGTATGAG GCGGTCGTGC TCGGACGCAG GGGCCTGAAC CCTCTCCAGA ACGCTGTTTT GGGAAGCATC GCGTCCAAGC TTGCCGTCAA GCTGTGTAAA ATACCCGTGT GGCTGGTGGG CGGCAGACCC GCGAGGGGAA AGGTGCTGAT TGCCGTGGAT CGCTCGGACA GTGCCATGCA GGCTGTGGAT CACGTGGGGA AGGTGCTCGG TGGAACGGGC ACTGCGATCG AGCTTGTTCA CGTCGTCAGA GGACTGGACG GCACGCTGGC AGGATACCAG AAGGTCTTCA TGGGTGAATA CATGCAAAGG CTGACCCGGG AGGCCGAGGA GCGGATCCGG CCCACTTTCG AGGAAGCGAT CGACCATTTG GAGGCCTTCG GGATTTCGGC GGGCAGAGTG ACCACCAAAG TCATCAACGG AGTGAAAAGC CGTGCCGGCG CAATTCTAGA GGAAGCGGAA ACCGGGGACT TCGGAACGAT CGTGGCGGGC CGGAGAGGGT TGACCCGGAC GGAGAATTAC GACATGGGCA GAGTGATCGC CAAGCTCCTC CAAATGGCCC GGCGTCAGGC CGTCTGGATC GTGGGATGCT AG
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Protein sequence | MSRNGKSILL ALDGSKQALE MVRYAARCLP RENEMVLFHV MSKVPEPLRD LGFDPGWHGE DKGLAEWEKQ QEETIEEFME TGRRALLSAG FASSAVKIKV SELKEGFARD IAAEAVNGYE AVVLGRRGLN PLQNAVLGSI ASKLAVKLCK IPVWLVGGRP ARGKVLIAVD RSDSAMQAVD HVGKVLGGTG TAIELVHVVR GLDGTLAGYQ KVFMGEYMQR LTREAEERIR PTFEEAIDHL EAFGISAGRV TTKVINGVKS RAGAILEEAE TGDFGTIVAG RRGLTRTENY DMGRVIAKLL QMARRQAVWI VGC
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