Gene Sfum_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1278 
Symbol 
ID4460861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1577230 
End bp1579134 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content59% 
IMG OID639702047 
Productacetyl-CoA hydrolase/transferase 
Protein accessionYP_845405 
Protein GI116748718 
COG category[C] Energy production and conversion 
COG ID[COG0427] Acetyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.863753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTCG ACGAGCACTG GAAGACTCAC TACCGCGAAC GCCTCGACAC CGCGAAGTCC 
ACACTCGAAG CGGCGATCAA AGACGGCAAC CGGATATTCA TCGCATCCGC CTGCGGTGAG
CCGCAGCATC TCGTCCGTGC TCTTGTGGAG CTGCTCCCGC GTTACCGGGA CCTGGAACTG
GTGCAAAATC TGTCGGTGGG GGAACTGCCG GAAGACTGGA GTGAGTTGAA GGATCACTGC
CGCCTGAAGA CTTTCTTCGT CGGGCCCCGC GTGCGCAAAG CGGTGAACGA GGGCTTTGCC
GACTATATTC CAACCTATTT TTCGGCCATT CCCGGCTTGA TCCGCGAAGA CAACCTGTGG
GCGGTCGACA TATGCCTGAT ACAGGTATCG CCGCCCGATG AACACGGCTT CTGCTCGCTG
GGCATCGCCG TCGAGATAAC GAAGTCGGCC GCGGATGCGG CCAAGATCGT CATCGCCCAG
GTCAATCCGA GAATGCCGCG GGTTTTGGGC GATTCCTTCC TGCACGTTTC CCAGATCGAC
CACTTCGTGG AGTACGAAGA ACCTCTGATC GAGGTGGTTT TTCGAGAGCG CAGCGCCATC
ACGGAGCGGA TCGCCAAGTA CGTCTCGCTG CTCGTCGAGG ACGGCTCCAC CCTCCAGGTC
GGTGTCGGCC GGATCGTCAA TTCCGTGCTC ACCTACCTGG AGGACAAGAA GGACCTGGGA
GTCCATACCG AAATTCTCAC GGACGCGCAT CTGCATCTGG TCAAGAAGGG CGTCATCACC
GGTCTGAGAA AAGAGGTGCA CCCGGGCCGG ATTGTGACCA GCGCGTGTAC GGGCAGCGCG
GATCTCTACA GTTTCGTTCA CAACAACCCC GAGGTCGAGA TCTACCCCAT CGAGTACGTC
AACGACCGCA GGCTGATCAG CCGACACGAT CAGATGGTCG CCATCAATTC CGCCCTGGAA
ATCGACCTCA GCGGGCAGGT CTGCTCGGAT TCCATCGGTC ACACCATCCA CAGCGGGATC
GGCGGTTTCG TGGACTTCAC GCACGGTGCT GCAACCGCCC GTCACGGCAA GAGCATCATC
GTGCTGCCGT CCACCAGCAC GGACGGCCGC CGATCGCGCA TAGTCAGCCA TCTGGCAAGC
GGCGCCGGAG TAGTGAGTTC CCGGAGCATG GTGCGGTACG TGGTCACCGA GTTCGGCATC
GCCTATCTGC ATGGAAAGAC CATTCGCGAG CGTGCCCTGG CCCTTATCAA TATTGCCCAC
CCGAAGTTCA GGGAACGCCT GCTCGGGGAA GCGAAACGAC TCCGGTACGT TTATGACGAC
CAGATCCTGC CTCCGATCTA CGAACCGCTG TATCCGGGCC AGTGGGAAAC GCATCGGCTT
TTTCCCGGAG ACAGGAACAT CTTCTTCCGG CCCATCAAGC CCACCGACGA AAGAGGCGTG
CAGGAATTCT TCTATTCCCT TCCCGACCAG GACATTTACT ACCGCTTCCT TTCCGCCATG
AAAGTGTTCC CTCATCGGAA CACGCAGGGC ATGTGCAACA TCGACTACGA ACACGAGATG
GCCATTGTGG GCGTCACCGG CGAGATCGGC AGTGAAACCA TCATCGGCCT CGGCCGGTAC
ATCCTGGATC AGAAGACCAA CATCGCCGAA GTGGACTTTG CGGTGGCGGC CGAATGGCAG
CGTATCGGAA TCGGGACCTT CCTGCTCCAC TATCTTTGTG AAATCGCCGG GAGCAAGGGG
ATCACGGGAT TCACGGCCTA CGTTCTGGCC GCCAACCGGA AGATGCTTTC GGTATTCCAC
AAAGTCGGCT ATTTCATTCA TACCACCCTG GAAGACGGGG TCTACGAGAT TTCGTTCCGT
TTCGACGAAC CGGCCTCGAC CTGCCCGGTG GATTGCCCAC CATGA
 
Protein sequence
MVFDEHWKTH YRERLDTAKS TLEAAIKDGN RIFIASACGE PQHLVRALVE LLPRYRDLEL 
VQNLSVGELP EDWSELKDHC RLKTFFVGPR VRKAVNEGFA DYIPTYFSAI PGLIREDNLW
AVDICLIQVS PPDEHGFCSL GIAVEITKSA ADAAKIVIAQ VNPRMPRVLG DSFLHVSQID
HFVEYEEPLI EVVFRERSAI TERIAKYVSL LVEDGSTLQV GVGRIVNSVL TYLEDKKDLG
VHTEILTDAH LHLVKKGVIT GLRKEVHPGR IVTSACTGSA DLYSFVHNNP EVEIYPIEYV
NDRRLISRHD QMVAINSALE IDLSGQVCSD SIGHTIHSGI GGFVDFTHGA ATARHGKSII
VLPSTSTDGR RSRIVSHLAS GAGVVSSRSM VRYVVTEFGI AYLHGKTIRE RALALINIAH
PKFRERLLGE AKRLRYVYDD QILPPIYEPL YPGQWETHRL FPGDRNIFFR PIKPTDERGV
QEFFYSLPDQ DIYYRFLSAM KVFPHRNTQG MCNIDYEHEM AIVGVTGEIG SETIIGLGRY
ILDQKTNIAE VDFAVAAEWQ RIGIGTFLLH YLCEIAGSKG ITGFTAYVLA ANRKMLSVFH
KVGYFIHTTL EDGVYEISFR FDEPASTCPV DCPP