Gene Sfum_1249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1249 
Symbol 
ID4461374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1542796 
End bp1543743 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content61% 
IMG OID639702017 
Producthypothetical protein 
Protein accessionYP_845376 
Protein GI116748689 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA GCGTCTCCAT CATGGCGATT CTTGTCGCGG TTCTTCCGGG TGCCGCCGGT 
GCCGCGAGCT TCGACTGCGG CAAGGCTTTC ACCCTCGTCG AAAAGACCGT CTGTTCCGAC
CGGGAGCTCT CCGGCCTCGA CGACTCCATG CAGCAGGCCT ATGACAAGGC ATTGGCCGTC
GTTCCGGACC CCGGGCCGTT GAGAAGGGAG CAAAGACAAT GGCTCAAGTC GGAGCGCGAT
GCCTGTCGGG ACGTGCGCTG TCTGAAAAGC CGGTACGAAA AACGATTGGG ACAACTGAAT
TCCCTCCTCG CCGCCGGGCA GGCCCCTCCC GCCGCCGGTG CTTCCGCCGC CCCGGGAACC
GCCGTGCGGG AGAAAAAACT CACGAGGGAG ACGCAAACCC TGTCTATCGA TCTGTCCTGG
CCTGAAATCC ACTCCGATGA GTATCCACAG GCCGCGGCCG CCCTCACGAA ACGGATCCAG
GCCGATATCG ACAAGGCCCA TAGGGAATTC TTGAAGGAAA CGGCCGAGGT GAAGCCGCCC
GATATCGGAG GGGAGAGAAT AAAGAACGGA TTGTCCGCGG CCTACAGGCT CACGTACAAT
GTGCGAGGGA TCGTCAGTCT GTATACGGAC ATCTACACCT TCACGGGGGG CGCTCACGGC
AGCACCGTCA GGACCGGGTA CACGTTCGAT CTCAAGAGCG GCAGGGACCG AGCCCTTGGG
GATTTCCTGG GGCCGGACTG GCAATCCGTC GCGAAAAGCG CGATCGTTCC GCAAATTAAT
GCCCGGTCCG AAGACTTCTT CGATGAATCG AGGCAGGGCC GGTTTGAGAT CGATCCCGCT
CAGTTCTACC TGACACCCAG GGGCGTGGTC GTGTTCTTCC AGCAGTACGA AATCGCCCCG
TACTCCTCGG GCATCCCCGA ATTCACCGTC GCGATCGAGC AGCCCTAG
 
Protein sequence
MKRSVSIMAI LVAVLPGAAG AASFDCGKAF TLVEKTVCSD RELSGLDDSM QQAYDKALAV 
VPDPGPLRRE QRQWLKSERD ACRDVRCLKS RYEKRLGQLN SLLAAGQAPP AAGASAAPGT
AVREKKLTRE TQTLSIDLSW PEIHSDEYPQ AAAALTKRIQ ADIDKAHREF LKETAEVKPP
DIGGERIKNG LSAAYRLTYN VRGIVSLYTD IYTFTGGAHG STVRTGYTFD LKSGRDRALG
DFLGPDWQSV AKSAIVPQIN ARSEDFFDES RQGRFEIDPA QFYLTPRGVV VFFQQYEIAP
YSSGIPEFTV AIEQP