| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1246 |
|---|
| Symbol | |
|---|
| ID | 4461371 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1539939 |
|---|
| End bp | 1540760 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639702014 |
|---|
| Product | 3'(2'),5'-bisphosphate nucleotidase |
|---|
| Protein accession | YP_845373 |
|---|
| Protein GI | 116748686 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
|---|
| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.757598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGTGA CATTGATTGA TCTCGACCAT TTGTCCGAAC TGGCAGTCAC GGCCGGCGAG
GCCATTCTCG AAATCTACGG CACGGAATTC AGCGTTGAAT CCAAGGAAGA CAAGTCCCCT
TTGACCCTGG CGGACAAGCG TTCCCACCGG ATCATCGTGG ATGCCCTCCG TTCGCGGTAT
CCCGATATTC CGGTACTGTC CGAGGAAGGC AGGGAAGTTC CGTACGCGGT CCGCAGGGAA
TGGAGCCGGT TCTGGCTGGT GGATCCGCTC GACGGCACAA AGGAGTTCGT GAAACGAAAC
GGCGAGTTCA CCGTGAACAT TGCCTTGATA GACGGAGTCA ACCCCGTCGT CGGCGTGATC
CTTGTGCCGG TCCTGAAGCG GCTTTTCCTC GCCGATGTCG GCCGGGGGTG CTGGGAAATC
GTCGAAGGTC GCAGGCGTCC CCTCCGCATC CCTGCCGTCC CCGACGGAAC GGTGCGCATC
GTGGAAAGCC GCTCGCATCC GTCTCCCGGT TTGGAGCCCA TTCTAAAACT CCTTCCGGCC
CATGAAATCG TGTCCAGGGG GAGTGCCTTG AAATTCTGCT CGGTCGCTGC CGGTGAAGCC
GACTTCTATC CGCGCTTCGG CCCGACGTGG GAATGGGACA CGGCAGCGGG ACAGGCCATC
GTGACCGCCG CCGGTGGAAC GGTGATCGAC TTCAAGGGAA AGCCGTTCGT CTACAACAAG
GAAAATCTCG TCAACGGGCC GTTTCTCGCG ATCCCCAGCC TGCATTGGGC CCGGGCGACC
GGAATCCTCG AGGCCGTGTC GCGGTTCGAT TCGGCGAAGT GA
|
|---|
| Protein sequence | MEVTLIDLDH LSELAVTAGE AILEIYGTEF SVESKEDKSP LTLADKRSHR IIVDALRSRY
PDIPVLSEEG REVPYAVRRE WSRFWLVDPL DGTKEFVKRN GEFTVNIALI DGVNPVVGVI
LVPVLKRLFL ADVGRGCWEI VEGRRRPLRI PAVPDGTVRI VESRSHPSPG LEPILKLLPA
HEIVSRGSAL KFCSVAAGEA DFYPRFGPTW EWDTAAGQAI VTAAGGTVID FKGKPFVYNK
ENLVNGPFLA IPSLHWARAT GILEAVSRFD SAK
|
|---|
| |