| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1245 |
|---|
| Symbol | |
|---|
| ID | 4461370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 1538940 |
|---|
| End bp | 1539908 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639702013 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_845372 |
|---|
| Protein GI | 116748685 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.240532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAT TTCTCGTTGA GATGCTCGTT TGCCCGAGCT GCCTCCCGGA GGAGGTCGGC
CTGTGCCTCA CAACGGTGGA AGCCGACGAC GAAGAGGTGA TCCGCGGCTC CCTTGCGTGC
CCGTCCTGCC GGGAAATCTT CCCCATCGCC GAGGGTACGG CGGTGATCCT GCCGACCGGC
GAACCGGACG ATCCGTCGCG GACCGGCTAT GAATCTTCCC GCGCCTTGTC CGCCTATCTC
TGGAGCCACT ACGCCGATCT CTTCGGCGAT GCGGAAGCTT GCACCGCTTA TCGTGAATGG
GCGTCCCTGA TCCCGCCGAC GGAGGGTGTT TTTTTGGATG CGGGCTGCGC GGTGGGCCGG
TTCAGCTTTG AAATGAGCCA GAAGAGTCAT TTCGTGATCG GCATCGACAA CTCGAAAAGC
TTCATTCATA CAGCCAGGAA GCTCCTGAAG AACCGGAGCA TCGATTTTGG CCTTGTCCTC
GAAGGAGAGT TGCGCGAAAA TCGGCGCTTC GAGCTTCCCG GCGCCTGGAA TACCGACAGG
GTTGAATTCC TGGTCGCCGA CGCCCAGGCT TTGCCTTTCC GGTCGGAGAC GTTTTCCTGC
CTTTCGTCTC TGAACCTGGT GGACAAGGTC CCCAGGCCGC TCGTCCATTT GCTCGAACTC
GGCAGGGTGG CCCGATCGTC GGGTTCCCGG CTGCTTTTCA CCGATCCGTT TTCCTGGTCC
ACGGAAGCCG CCGCCCGGGA ACACTGGCTG GGAGGCCTGC CCGGAGGGGT GTTTTCGGGG
AGAGGCATCG ACAACGTCAC GTCGATCCTC AAGGGGGAGC GCGGGGGGCT TCGCCCGCCC
TGGACGATCG AGGGCCAGGG CAGCGTCTGG TGGAAGATCC GCAACCATTG CAACCACTTC
GAACTGATCC GCAGCCGGTA CGTTACGGCC GTGCGCCCTC CGATTCCGCT CGCACCCGCG
ACCGGTTGA
|
|---|
| Protein sequence | MKPFLVEMLV CPSCLPEEVG LCLTTVEADD EEVIRGSLAC PSCREIFPIA EGTAVILPTG
EPDDPSRTGY ESSRALSAYL WSHYADLFGD AEACTAYREW ASLIPPTEGV FLDAGCAVGR
FSFEMSQKSH FVIGIDNSKS FIHTARKLLK NRSIDFGLVL EGELRENRRF ELPGAWNTDR
VEFLVADAQA LPFRSETFSC LSSLNLVDKV PRPLVHLLEL GRVARSSGSR LLFTDPFSWS
TEAAAREHWL GGLPGGVFSG RGIDNVTSIL KGERGGLRPP WTIEGQGSVW WKIRNHCNHF
ELIRSRYVTA VRPPIPLAPA TG
|
|---|
| |