Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1236 |
Symbol | |
ID | 4461007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1530543 |
End bp | 1531325 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639702004 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_845363 |
Protein GI | 116748676 |
COG category | [R] General function prediction only |
COG ID | [COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTCA TGTTTCAGGT CATTGCCAGC GGTTCCAAGG GAAACTCGAT CCTGATTTCA AGCCCCCGGA CGCACATCCT CCTGGATGCC GGGCTGAGCG CGAGAGAGCT TGTCCGCCGG CTCGAAAAGA CTTCCGTGAA CGCCCGGCAA CTGGACGCGG TGGTCGTCAG CCACGAGCAC GCCGACCATG TTCGGGGCGT CGGAGTGCTG AGCCGCCGGT TCGAACTGGT CGTCCACCTC AGCCAGGGTT CCCTGGAAGG CCTGGACCCG CAGATCGGCC GTCTGGCCGG CCACCAGGTC TTTCAGCCGG GCCGGGCTTT CGACATCGGC GACCTTCGGC TGCATCCTTT TCCCATTTCC CACGACGCCC GGGAACCGTC CGGTTTCGTT GTCGAGCACG CCGGCGTGAG GCTAGGCATC TGCACCGACC TCGGGGTCGT CACCGAGCTT GTCAAGGCAA GACTGCAGGG ATGCTCCGGC CTGGTCATCG AAGCAAATCA CGATCCGGAC CTCCTGATCA ACGGCCCCTA TCCGTGGCAC CTCAAACAGC GCATCAGGAG CCGGCACGGG CATCTGTCCA ACATCGACAG CCTGGAGCTG CTGAAATGCC TCTACAACGA ATGCTTGCGT TCAGTTGTGT TCGCCCACCT GAGCGAAACG AACAACCACC CCGAACTCGT GCTTGAAAAC TCCAGGGATT TGGTCAACAA TCCCCGGTGG GAGAAGGTCC GTTTCCAAGT TGGAAAACAG CATGACGTCA CGCCGCCCGT CGAACTGATG TGA
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Protein sequence | MSLMFQVIAS GSKGNSILIS SPRTHILLDA GLSARELVRR LEKTSVNARQ LDAVVVSHEH ADHVRGVGVL SRRFELVVHL SQGSLEGLDP QIGRLAGHQV FQPGRAFDIG DLRLHPFPIS HDAREPSGFV VEHAGVRLGI CTDLGVVTEL VKARLQGCSG LVIEANHDPD LLINGPYPWH LKQRIRSRHG HLSNIDSLEL LKCLYNECLR SVVFAHLSET NNHPELVLEN SRDLVNNPRW EKVRFQVGKQ HDVTPPVELM
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