Gene Sfum_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1236 
Symbol 
ID4461007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1530543 
End bp1531325 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content61% 
IMG OID639702004 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_845363 
Protein GI116748676 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTCA TGTTTCAGGT CATTGCCAGC GGTTCCAAGG GAAACTCGAT CCTGATTTCA 
AGCCCCCGGA CGCACATCCT CCTGGATGCC GGGCTGAGCG CGAGAGAGCT TGTCCGCCGG
CTCGAAAAGA CTTCCGTGAA CGCCCGGCAA CTGGACGCGG TGGTCGTCAG CCACGAGCAC
GCCGACCATG TTCGGGGCGT CGGAGTGCTG AGCCGCCGGT TCGAACTGGT CGTCCACCTC
AGCCAGGGTT CCCTGGAAGG CCTGGACCCG CAGATCGGCC GTCTGGCCGG CCACCAGGTC
TTTCAGCCGG GCCGGGCTTT CGACATCGGC GACCTTCGGC TGCATCCTTT TCCCATTTCC
CACGACGCCC GGGAACCGTC CGGTTTCGTT GTCGAGCACG CCGGCGTGAG GCTAGGCATC
TGCACCGACC TCGGGGTCGT CACCGAGCTT GTCAAGGCAA GACTGCAGGG ATGCTCCGGC
CTGGTCATCG AAGCAAATCA CGATCCGGAC CTCCTGATCA ACGGCCCCTA TCCGTGGCAC
CTCAAACAGC GCATCAGGAG CCGGCACGGG CATCTGTCCA ACATCGACAG CCTGGAGCTG
CTGAAATGCC TCTACAACGA ATGCTTGCGT TCAGTTGTGT TCGCCCACCT GAGCGAAACG
AACAACCACC CCGAACTCGT GCTTGAAAAC TCCAGGGATT TGGTCAACAA TCCCCGGTGG
GAGAAGGTCC GTTTCCAAGT TGGAAAACAG CATGACGTCA CGCCGCCCGT CGAACTGATG
TGA
 
Protein sequence
MSLMFQVIAS GSKGNSILIS SPRTHILLDA GLSARELVRR LEKTSVNARQ LDAVVVSHEH 
ADHVRGVGVL SRRFELVVHL SQGSLEGLDP QIGRLAGHQV FQPGRAFDIG DLRLHPFPIS
HDAREPSGFV VEHAGVRLGI CTDLGVVTEL VKARLQGCSG LVIEANHDPD LLINGPYPWH
LKQRIRSRHG HLSNIDSLEL LKCLYNECLR SVVFAHLSET NNHPELVLEN SRDLVNNPRW
EKVRFQVGKQ HDVTPPVELM