Gene Sfum_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1235 
Symbol 
ID4461006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1529043 
End bp1530299 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content56% 
IMG OID639702003 
Productprocessing peptidase 
Protein accessionYP_845362 
Protein GI116748675 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCATCAAA AAACGGTTCT CCGCAACGGT ATTCGTGTGC TGACCGAAAA GATTCCTTTT 
GCGCATTCGG TATCTACCGG GATTTGGGTC GGCGTGGGAT CAAGAGACGA GGAAGAGGAT
GAGAGGGGGA TCACTCACTT CATCGAGCAC ATGCTGTTCA AGGGAACTCA GCGACGAAGC
GCGCTCGACA TAGCCAAAGA GTTCGATTCC GTCGGGGGGT TCGCCAACGC CTTCACATCG
AAGGAACACG TCTGCGTTCA CGCCAAGGTT CTGGCATCCC ACCTCCCCCT GGTGGTGGAC
GTCCTTTCGG ATATCTTCTT GAATTCCGTG TTCTCGGACA ACGAAATCGA ACGGGAACAA
CAGGTGATCC TCCAGGAAAT CCGGATGATC GAAGATACTC CGGATGAGTA CGTTCACATC
CTTTTCCAGG AGATGTTCTG GAAGGACAAC CCCCTGGGGC TGCCGATCTA TGGATCGGCA
CAGGCCCTGG AGTCGCTCGA CAGGACAAAG GTGCTTCGTT ACCTGTCGCG GCATTTCCAC
TCCGACAAGA TCGTCATCTC CGCGGCCGGC AACCTGGATC ACGATCGTTT CCTGGAGCTC
ATCGGCCCCC CCATGGAAGG TCTCAACCAT CCCGCGCTGC CCGGCCGGCG GGTCGTTCCA
AAGAACCACC CCCTTGTCAG GATCATTCCC AAGGACCTGG AACTGGTCCA CGTCTGTCTC
GGAATGAGAG GCAATTCCCA GGTGGACGAA AACCGGTTCG CCTCGCATCT TTTGAACGTG
GTACTGGGAA GCAGCATGAG CAGCAGGCTG TTCCAGGAAA TCAGGGAAAA ACGAGGCCTC
GCCTACTCGG TCTATTCATT CTCGCACAGT CATGTGGACG CGGGCATCCT TGGAATTTAC
GCCGGAGTCG GCGCGCGGAA CGTGCAAGAG ACACTCGAGC TCATCCGGGA ACAGCTCTCC
CTACTGGCCG ATGAACTCAT CTCCGACGAG GAGCTCAATG CCGCCAAGGA ATACCTGAGG
GGAAGCATGT ACCTGAATGC GGAAAGCACC GACTCCCGAA TGAACCGGAT GGCCAAGAAC
GAGTTTCTTT TCGGTCGCTT TGTCGATTTT TCGGAAATCG AGGAGAAGAT TGTCGGTGTC
CGCGCGGAGC AGATCCGGGA TTGGTTCCGG GAAGTCTATA CACCGCAGGA GTTGACGGTG
TTGCTAATGG GACCGGTGGA GATGGACCGC GCCGATGTGG AAAAGGCACT CTCCTGA
 
Protein sequence
MHQKTVLRNG IRVLTEKIPF AHSVSTGIWV GVGSRDEEED ERGITHFIEH MLFKGTQRRS 
ALDIAKEFDS VGGFANAFTS KEHVCVHAKV LASHLPLVVD VLSDIFLNSV FSDNEIEREQ
QVILQEIRMI EDTPDEYVHI LFQEMFWKDN PLGLPIYGSA QALESLDRTK VLRYLSRHFH
SDKIVISAAG NLDHDRFLEL IGPPMEGLNH PALPGRRVVP KNHPLVRIIP KDLELVHVCL
GMRGNSQVDE NRFASHLLNV VLGSSMSSRL FQEIREKRGL AYSVYSFSHS HVDAGILGIY
AGVGARNVQE TLELIREQLS LLADELISDE ELNAAKEYLR GSMYLNAEST DSRMNRMAKN
EFLFGRFVDF SEIEEKIVGV RAEQIRDWFR EVYTPQELTV LLMGPVEMDR ADVEKALS