| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1234 |
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| Symbol | |
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| ID | 4461005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1526783 |
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| End bp | 1528882 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639702002 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_845361 |
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| Protein GI | 116748674 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATT CAGTTCAAGT GGAAGTCGGC GGTCGCCCGA TGGTATTCGA AGCCGGGGAG
ATTGCCCGCC AGGCCGGCGG TTCCGTGCTC ATGCGTTACG GAGACACGGT GGTGCTTATT
GCAGCGACGA AGGAGGACCG AATTCGGGAA GGAATCGATT TCGTGCCTCT TATGGTGGAC
TATCAGGAGA TGAGTTATGC CGCGGGGCGA ATTCCGGGCG GGTTCTTCCG CCGCGAGATC
GGCCGTCCGA GCGAGAAGGA AACTCTGACC TCCCGCCTGA TCGACCGGCC CATCCGTCCG
CTCTTTCCGA AAAAATACTG CTACGAGACT CAGGTGGTCG CCACAGTCCT TTCGGTGGAC
ATGGAGAATG AACCTGATGT CGTGGCGCTG ACCGGAGCTT CGACGGCTCT CCATATTTCC
CCGGTGCCCT TCCAGGGACC GGTGGCGGCC GTACGCGTCG GCAGAATCAA CGGATCCTTC
GCCATCAATC CCAGCGCGAA GGAACTCCTC GAGAGCGACC TGAACGTCGT GGTGGCCGGC
TCACGCGACG CGGTGGTGAT GGTCGAAGGC GGCGCGGATT TCGTTTCGGA AGACGATCTC
GTCGATGCCA TCGACTTCGG GCACAAAGCC ATTCTCCCCA TCCTGGACGC CCAGGACGAG
CTTCAGCGCA GGATCGCACC GGTAAAGGAG GCGCCTCCCG AGGTGGTGAG GAATGAATCC
CTGGTCCAGG CTGTCCGGGA CGCCGCCGCG GCGGAAATGC GCGCGGTCAT GACCACGCCG
GAAAAGCACC CGCGTCGCGA TCGGAAGAAA GCCCTGAAAG AACGTATCCA GGCGGAACTG
GTCTCCGATG ATCCCGATCG CCCGAAGCAG ATCGACAATA TTCTTGAAGA CCTGGAAAAG
GAAGTGGTTC GGCGCATGAT GGTGGAGGAA GGCCGCCGGA TCGACGGAAG AAGGTTCGAC
GAGATCCGCC CCATCAACAT CCAGGCGGGC GTTCTGCCGA GAACTCACGG TTCGGCGGTT
TTCACCCGCG GCGAAACACA GGTGCTGGCC GTCGTGACGC TCGGCTCCTC TTCGGATGAG
CAGAAGATCG AGGCCCTGGC GGGTGAAACC TTCAAGTCGT TCATGCTCCA CTACAATTTC
CCCGCGTTTT CCGTAGGCGA AGTCCGTCCG CTCCGCGGGC CGGGACGTCG GGAGATCGGA
CACGGGGCTC TCGCTGAACG ATCGGTGAAA GCCGTGCTTC CCAGGGACGG CGAATTCCCA
TACACCATCC GGGTGGTCTC CGAGGTCCTG GAATCCAACG GATCGAGCTC CATGGCCACC
GTTTGCGGGT CTTCGCTGGC GCTCATGGAC GCAGGGGTTC CCATCACCGA ACCGGTCGGG
GGCATCGCCA TGGGGTTGGT GAAGGAAGGG GACAAAATCA TCGTTCTCTC GGACATCCTT
GGCGATGAAG ACCACCTTGG CGATATGGAT TTCAAGGTCA CGGGCAGCGA ACGGGGCATC
ACTGCGATCC AGATGGACGT GAAGATCGCC GGAATCGACC GCGGCATCAT GCAGCGCGCA
CTGGAACAGG CGCGCGCCGG CCGAATCTTC ATCCTGGGGA AAATGAAGGA AGTGCTGTCG
GCCCCGAGGC CTGAACTGTC CCCGTACGCC CCCCGCGTCA TCACCATCAT GATCAACCCG
GAAAAGATCC GCGACGTGAT CGGACCGGGA GGGAAGGTCA TCCGTTCCAT CGTTGCCGAA
ACGGGGGCCA AGATCGATAT CGAAGATTCC GGAAAAGTCG TCATCATGAG CCCGGACGGC
GCCGCCTGCG ACAAGGCGGT GGAGCGGATC CGGGGGCTGA CGCAGGAACC CGAGGTGGGG
CAGCTCTACA TGTCCCGCAT TGTACGCGTC ACCGATTTCG GAGCCTTTGC GGAAATCCTG
CCCAACATCG AAGGTCTGAT ACACATCTCC CAGCTCGAGC ACAGGCGGGT GCGCAAGGTC
ACCGACGTGG TCCAGGAAGG GGACGAGGTT CTTGTCAAGG TCATCGAAAT CGACAAGGAC
GGGCGAATCC GCCTGAGTCG GAAAGCTGCC CTCGAAAAAC CTGAAGGCGG CGGCCAATAG
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| Protein sequence | MKHSVQVEVG GRPMVFEAGE IARQAGGSVL MRYGDTVVLI AATKEDRIRE GIDFVPLMVD
YQEMSYAAGR IPGGFFRREI GRPSEKETLT SRLIDRPIRP LFPKKYCYET QVVATVLSVD
MENEPDVVAL TGASTALHIS PVPFQGPVAA VRVGRINGSF AINPSAKELL ESDLNVVVAG
SRDAVVMVEG GADFVSEDDL VDAIDFGHKA ILPILDAQDE LQRRIAPVKE APPEVVRNES
LVQAVRDAAA AEMRAVMTTP EKHPRRDRKK ALKERIQAEL VSDDPDRPKQ IDNILEDLEK
EVVRRMMVEE GRRIDGRRFD EIRPINIQAG VLPRTHGSAV FTRGETQVLA VVTLGSSSDE
QKIEALAGET FKSFMLHYNF PAFSVGEVRP LRGPGRREIG HGALAERSVK AVLPRDGEFP
YTIRVVSEVL ESNGSSSMAT VCGSSLALMD AGVPITEPVG GIAMGLVKEG DKIIVLSDIL
GDEDHLGDMD FKVTGSERGI TAIQMDVKIA GIDRGIMQRA LEQARAGRIF ILGKMKEVLS
APRPELSPYA PRVITIMINP EKIRDVIGPG GKVIRSIVAE TGAKIDIEDS GKVVIMSPDG
AACDKAVERI RGLTQEPEVG QLYMSRIVRV TDFGAFAEIL PNIEGLIHIS QLEHRRVRKV
TDVVQEGDEV LVKVIEIDKD GRIRLSRKAA LEKPEGGGQ
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