Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1232 |
Symbol | |
ID | 4461003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1525382 |
End bp | 1526302 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639702000 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_845359 |
Protein GI | 116748672 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGAAA AGGAGCCGAG CGGGCTCCTG GTTCTCGACA AGCCTGAAGG AATGACGTCC TCGACCCTCG TCACCAGGGT CAAGAGGCTG TTAGGCCTTC GCAAGGCAGG CCACTGCGGA ACGCTGGACC CTTTCGCCAC GGGTGTGCTC CTTGTATGCG TGAACCAGGC CACTCGATTC GCCGAGCAGC TGACCGGCCA GACCAAAGTC TACCGTTTCA CCGCGCGCTT GGGCATCGAA ACGGATACGC TCGACAGGAC CGGCACGGTG GTGCGCACCC GCGATGACGT GGTCCCGTCC GAACGGGAAC TGCTGGAGGC GGTGCGCTTG CACGAGGGGA CACAGGTGCA GGAGGTTCCT CGGTACGCGG CCGTGAAGGT TCAGGGAAAA CGGCTGTACG AGCTGGCGAG AAAGGGAATC GATGTCGAGC TGCCCAGGCG GGAAGTGCAT ATCCATCGCT TCGACTTGAT TTCCTACCGT TACCCCGAGG TTGTTCTGGA AACGAAGTGC TCGAAGGGCA CGTACGTTCG TCAGTTGGCG GCGGATTTGG GGAGGCGCCT GGGATGCGGG GCTCACGTCA TGCATCTGCG GCGGCTCGCG TGCGGCCCCT TCGGCCTGGA GCGGGCAAGC TCGCTGGAGC AGATGCACGA CGGGGCTTCG GACGGCTCCT GGTTGGCGAA GCTCGTTCCC ATGGCCGACG CGCTTTCGCA CCTGCCCGCG CTGACGATCG AGGACGGGCA GGTTCTCAGT CGCTTGCGGT ACGGACAGCT TGACGCAGAC TGGGAGGCGG AACACTCCGG ACGGTTTTCC CGGCGCGTGG GACCGGTGCG TATCGTCACC GCCGACGGAC GCCTGGCGGC ACTCTGGTGG CCGTGGCCGG AATCGGAGCA CCAACGCCGT TTACGCGTGT TTCAACTTTG A
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Protein sequence | MREKEPSGLL VLDKPEGMTS STLVTRVKRL LGLRKAGHCG TLDPFATGVL LVCVNQATRF AEQLTGQTKV YRFTARLGIE TDTLDRTGTV VRTRDDVVPS ERELLEAVRL HEGTQVQEVP RYAAVKVQGK RLYELARKGI DVELPRREVH IHRFDLISYR YPEVVLETKC SKGTYVRQLA ADLGRRLGCG AHVMHLRRLA CGPFGLERAS SLEQMHDGAS DGSWLAKLVP MADALSHLPA LTIEDGQVLS RLRYGQLDAD WEAEHSGRFS RRVGPVRIVT ADGRLAALWW PWPESEHQRR LRVFQL
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