Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1222 |
Symbol | |
ID | 4460992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 1509943 |
End bp | 1511124 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639701989 |
Product | amidohydrolase |
Protein accession | YP_845349 |
Protein GI | 116748662 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00115214 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.142567 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCA GCGGTCTGCC GCCCATGCAT GAATGGCTCG TGGAATTGAG AAGACACTTC CACCGGTATC CGGAACCGGC ATTCGGGGAG GAAAAGACGG CCGCGAAGAT CTGCGAGGTT CTCGACGCGC TTGGAGTGCC ACACCTCAGG GAGGTTGGAG GCACGGGGGT GATTGCCGCC CTGGGATGTC GGAGGCCGGG GGGAACGCTG GCGTTGCGCG CCGACATGGA CGCTCTGCCG TTGGATGAGG CCGGCGATGT GCCCTACGGC TCACTCAACC CCGGCATGAT GCACGCCTGC GGACATGACG GGCACATGAC CGTGGCGCTC GGCGTCCTGC GGCTGCTGCT CGAGAACGAT TGGCCGGAAC GGGGCGGCGG GAAGGTGCTT TTCATCTTTC AACCCGCGGA GGAGGGCGGG CGCGGGGGCG CGCTGGCCAT GCTCGAAACC GGGCTGTTCG ACCCGGAGCG GATCGACGCG ATTTTTGCGG TGCACATGTA TCCGGAGCTG CCCGTCGGAA GGATCGCGCT TGCCGCAACC ACGAGCAATG CGGCATCCGA CAGCATCTCC GTTCGCATCG TGGGAAAAGG AGGACACGGG GCGCACCCCG AGCTGTGCGT GGACCCGATC GTCGCAGGGT CCTACTTCGT CGCTCAACTG CAAAGCATCG TCAGCCGCAG CGTGCCGCCT CTGGACAGTG CCGTGCTCAC CATCGGCAGC TTTCACGGGG GGACGGCGCG CAACATCATT CCCGAGGAAG TGCGAATGGA GGGGACCCTG CGGACGTTCC GATCCCAGGT CCGGGACCTG GTGTTGCGAC GCGTGGAAGA GGCGGCGCGA GGGCTCGAAT CTTCCCATGG CGTGGTCGTC GAACTGAAAA TCGATTCGGG ATATCCTCCC GTGGTGAACC ATCCGTCCGT GGTCGAATAT GTCGTGGACA GGGCGCGGGG ACTACTTGGC GCCGAATCCG TTCTCCTGGA GCCCCCGTCC ATGGGGGCCG AAGACTTTGC CTATTTTCTC CAGCGGTGGC CCGGGGCATT GATACGTCTC GGCTGCCACG ATCCGGCCAA AGGGTTTGCG CACGGGCTCC ACTCGCCGCA CTTCGATTTT GACGAAAGCG CCCTGGATGT AGGGGTGAAG CTCGTGGCGG ACCTGCTCAC CCATTTTGCC CAAACGGGCT GA
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Protein sequence | MPVSGLPPMH EWLVELRRHF HRYPEPAFGE EKTAAKICEV LDALGVPHLR EVGGTGVIAA LGCRRPGGTL ALRADMDALP LDEAGDVPYG SLNPGMMHAC GHDGHMTVAL GVLRLLLEND WPERGGGKVL FIFQPAEEGG RGGALAMLET GLFDPERIDA IFAVHMYPEL PVGRIALAAT TSNAASDSIS VRIVGKGGHG AHPELCVDPI VAGSYFVAQL QSIVSRSVPP LDSAVLTIGS FHGGTARNII PEEVRMEGTL RTFRSQVRDL VLRRVEEAAR GLESSHGVVV ELKIDSGYPP VVNHPSVVEY VVDRARGLLG AESVLLEPPS MGAEDFAYFL QRWPGALIRL GCHDPAKGFA HGLHSPHFDF DESALDVGVK LVADLLTHFA QTG
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