Gene Sfum_1222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1222 
Symbol 
ID4460992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1509943 
End bp1511124 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content64% 
IMG OID639701989 
Productamidohydrolase 
Protein accessionYP_845349 
Protein GI116748662 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00115214 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.142567 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTCA GCGGTCTGCC GCCCATGCAT GAATGGCTCG TGGAATTGAG AAGACACTTC 
CACCGGTATC CGGAACCGGC ATTCGGGGAG GAAAAGACGG CCGCGAAGAT CTGCGAGGTT
CTCGACGCGC TTGGAGTGCC ACACCTCAGG GAGGTTGGAG GCACGGGGGT GATTGCCGCC
CTGGGATGTC GGAGGCCGGG GGGAACGCTG GCGTTGCGCG CCGACATGGA CGCTCTGCCG
TTGGATGAGG CCGGCGATGT GCCCTACGGC TCACTCAACC CCGGCATGAT GCACGCCTGC
GGACATGACG GGCACATGAC CGTGGCGCTC GGCGTCCTGC GGCTGCTGCT CGAGAACGAT
TGGCCGGAAC GGGGCGGCGG GAAGGTGCTT TTCATCTTTC AACCCGCGGA GGAGGGCGGG
CGCGGGGGCG CGCTGGCCAT GCTCGAAACC GGGCTGTTCG ACCCGGAGCG GATCGACGCG
ATTTTTGCGG TGCACATGTA TCCGGAGCTG CCCGTCGGAA GGATCGCGCT TGCCGCAACC
ACGAGCAATG CGGCATCCGA CAGCATCTCC GTTCGCATCG TGGGAAAAGG AGGACACGGG
GCGCACCCCG AGCTGTGCGT GGACCCGATC GTCGCAGGGT CCTACTTCGT CGCTCAACTG
CAAAGCATCG TCAGCCGCAG CGTGCCGCCT CTGGACAGTG CCGTGCTCAC CATCGGCAGC
TTTCACGGGG GGACGGCGCG CAACATCATT CCCGAGGAAG TGCGAATGGA GGGGACCCTG
CGGACGTTCC GATCCCAGGT CCGGGACCTG GTGTTGCGAC GCGTGGAAGA GGCGGCGCGA
GGGCTCGAAT CTTCCCATGG CGTGGTCGTC GAACTGAAAA TCGATTCGGG ATATCCTCCC
GTGGTGAACC ATCCGTCCGT GGTCGAATAT GTCGTGGACA GGGCGCGGGG ACTACTTGGC
GCCGAATCCG TTCTCCTGGA GCCCCCGTCC ATGGGGGCCG AAGACTTTGC CTATTTTCTC
CAGCGGTGGC CCGGGGCATT GATACGTCTC GGCTGCCACG ATCCGGCCAA AGGGTTTGCG
CACGGGCTCC ACTCGCCGCA CTTCGATTTT GACGAAAGCG CCCTGGATGT AGGGGTGAAG
CTCGTGGCGG ACCTGCTCAC CCATTTTGCC CAAACGGGCT GA
 
Protein sequence
MPVSGLPPMH EWLVELRRHF HRYPEPAFGE EKTAAKICEV LDALGVPHLR EVGGTGVIAA 
LGCRRPGGTL ALRADMDALP LDEAGDVPYG SLNPGMMHAC GHDGHMTVAL GVLRLLLEND
WPERGGGKVL FIFQPAEEGG RGGALAMLET GLFDPERIDA IFAVHMYPEL PVGRIALAAT
TSNAASDSIS VRIVGKGGHG AHPELCVDPI VAGSYFVAQL QSIVSRSVPP LDSAVLTIGS
FHGGTARNII PEEVRMEGTL RTFRSQVRDL VLRRVEEAAR GLESSHGVVV ELKIDSGYPP
VVNHPSVVEY VVDRARGLLG AESVLLEPPS MGAEDFAYFL QRWPGALIRL GCHDPAKGFA
HGLHSPHFDF DESALDVGVK LVADLLTHFA QTG