| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1216 |
|---|
| Symbol | |
|---|
| ID | 4460641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1502859 |
|---|
| End bp | 1503293 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639701983 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_845343 |
|---|
| Protein GI | 116748656 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.357434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA TGCAAGTGAG CAGCCGGGTG CGGGTCATCT ATGGCGATAC CGATGCCATG
GGGCAGGCCT ACTACGGGAA CTATCTGAAG TGGTTTGAGG TCGGACGTGC CGAGTGGTTT
CGCAGTCGCG GTCTGACCTA CAGGGAAGTT GAAAGCAGGG GAGTCTATCT TCCGGTGGTC
GAGGCCCATT GCAACTACCG GAAGCCGGCC TTCTACGACG ATGTCCTTAC CATTGCGACG
CGTTTCGCCT TCTCCGGGCC GGCACGCCTG AGGTTCGAAT ATGAAATCGC CAGGGACGGG
GAGGTCCTCA CCACCGGCTA CACCATCCAC GTATGTGTCA CCAGGGACCG CAAGGTGCTC
AAACCCCCCG CCTACCTTAG GAACGTGCTG GAGGGAGGCG GCGGTGCGGA CGGGGCGGAG
GATCGAGGAG CGTGA
|
|---|
| Protein sequence | MALMQVSSRV RVIYGDTDAM GQAYYGNYLK WFEVGRAEWF RSRGLTYREV ESRGVYLPVV
EAHCNYRKPA FYDDVLTIAT RFAFSGPARL RFEYEIARDG EVLTTGYTIH VCVTRDRKVL
KPPAYLRNVL EGGGGADGAE DRGA
|
|---|
| |