Gene Sfum_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1206 
Symbol 
ID4460631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1492483 
End bp1492947 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content62% 
IMG OID639701973 
ProductNUDIX hydrolase 
Protein accessionYP_845334 
Protein GI116748647 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.483034 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAGCT CCGACACCGT TTATTGCCCC GCCTGCGGGA CTGCCGTCAG GACCTATCGA 
AATCCGCTCC TGACGGTGGA CGTCATCATA GACCTGGGGA GGCGCGGAAT CGTTCTCATA
GAGCGGAAAA ACCCTCCGTT CGGGTGGGCG TTGCCGGGAG GATTCGTCGA CTACGGTGAA
TCCCTGGAAA CGGCTGTCCG GCGGGAAGCA CTGGAGGAGA CCGGATTGCG GTTGAAGCAT
TTGCGACAAT TCCGAGCCTA CTCGGAGCCC GCGCGGGATC CGCGCCATCA CACGGTTTCA
GTGGTGTTCA CCGCCGCGGG CGTTGGGGAG CCGCGGGCGG CCGATGACGC GCGAAGTCTC
GCCGTTTTTG CCGCCGGGAG CCTGCCTGCC GTTCTGGCCT TCGATCATGG CCGGATTCTG
GGAGATTACT TCGCATCGAT TGTTAAAACG GGGAGAGTCT GTTGA
 
Protein sequence
MTSSDTVYCP ACGTAVRTYR NPLLTVDVII DLGRRGIVLI ERKNPPFGWA LPGGFVDYGE 
SLETAVRREA LEETGLRLKH LRQFRAYSEP ARDPRHHTVS VVFTAAGVGE PRAADDARSL
AVFAAGSLPA VLAFDHGRIL GDYFASIVKT GRVC