| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1202 |
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| Symbol | |
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| ID | 4460474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1487143 |
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| End bp | 1489665 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639701969 |
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| Product | preprotein translocase, SecA subunit |
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| Protein accession | YP_845330 |
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| Protein GI | 116748643 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.592039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.254631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACGG ACATCCTCAA GAAGATATTT GGCAGCCAGA ATGAGAGAAT CCTCAAGCGG
ATTGCTCCTC TGGTGGATGA GATCAATTCG TACGAGCCCG TTATGCGCAA GTTGAGTGAC
GCGGCGCTCA AGGCGAAAAC TCCGGAATTC AAACAGCGCA TCGCAAACGG CGAACCTCTG
GACGATCTCC TGCCCGAGGC GTTTGCGGTG GCCCGCGAGG GCGCGGTGCG GACCCTCGGG
ATGCGTCCGT TCGACGTGCA GATGATCGGG GGCATCGTGC TGCACGAGGG CATGATTGCG
GAAATGAAGA CGGGCGAAGG CAAGACGCTG GTCGCGGTCA TGCCCATCTA TTTGAACGCG
CTGACCGGGC GGGGAGTGCA CCTGGTTACG GTCAACGATT ACCTGGCGCG GCGTGACAGC
GAATGGATGG GCCAGGTTTA CAAGTTCCTG GGGCTTTCGG TGGGGTGCAT CGTTCACGGA
CTGGACGATC CCGAGCGCAA GGAAGCTTAC GGCGCCGATG TGACTTACGG GACCAACAAC
GAGTACGGAT TCGACTACCT GCGGGACAAT ATGAAATTCC GCATCGAGGA TATGGTTCAG
CGGGAGCTGA ACTATGCCAT TGTGGACGAG GTCGACAGTA TTCTCATCGA CGAGGCCCGG
ACCCCGCTCA TCATCTCCGG TCCGGCGGAG AAGTCCACGG CGCTCTACTA CAATATCAAC
AGGATCATCC CCCAGCTCAA ACCCGAAACT CATTACACCA AGGAAGAGAA AAGCCGCACC
GTGGCTCTGA CTGAGGACGG GGTGACCAGA ACGGAGAAGC TGCTCGGCGT CGACAACCTC
TACGATCCGA GACAGATCGA CATCCTGCAT CACGTTCAAC AGGCTCTGCG CGCCCATGTG
CTGTTCAAAC GGGACGTCGA CTACATCGTG AAGGACGGCA AAGTGATCAT CGTCGATGAA
TTCACCGGCC GGCTCATGCC CGGTCGCCGT TACAGCGAGG GGCTGCACCA GGCGCTGGAA
GCCAAGGAAA ACGTGCACAT CGAAAACGAG AACCAGACCC TGGCCTCCAT CACCTTCCAG
AACTACTTCC GAATGTTCGA CAAGCTGGCG GGCATGACCG GCACGGCGGA AACCGAAGCC
GCCGAGTTCG CCAAGATATA CAAGCTCGAG GTTGTCGTCA TCCCGACGCA CCGGAAGATG
ATCCGGGAAG ACTATGCCGA CTGCATCTAC AGGACCGAGG CCGAGAAATT CCGAGCCGTG
GCCGAGGAAA TCAAGGAAGC ATACGCCGTC AAGCGCCCGG TCCTGGTCGG CACGGTCAAC
ATCGCGAAGT CCGAGAAACT GAGCGGCATA CTGAAGCGGC AGGGCGTTCC CCACCAGGTG
CTCAATGCCA AGCACCACGA GAAGGAAGCG GAGATCGTGG CTCTGGCCGG GCAGCCGGGG
GCGGTCACCA TCTCCACGAA CATGGCCGGT CGAGGAACCG ATATCGTGCT GGGGCCCGGC
GTCGTGGATG TGGGAGGGCT CCACATCATC GGAACCGAGC GCCATGAAGC CCGCCGCATC
GACAACCAAC TCAGAGGCCG GTCGGGCAGG CAGGGGGATC CCGGGTCGTC ACGGTTCTAC
CTGTCCCTGG AAGACGATCT GATGCGGATC TTTGCGGCGG ACCGGCTGTC GGGCCTCATG
CAGAGAATCG GAATGAAGGA AGACGAGCCC ATCGAACATC GCCTCATCAC CAAGGCCATC
GAAAACGCCC AGAGCAAGGT GGAAGCTCAG AACTTCAGTA TCCGCAAACA GTTGCTCGAA
TACGACGATG TCATGAACCA GCAGCGCGAG GTGATCTACC GCCAGCGCCG CGAGGCCTTG
CAGGGCGAAA ACCTCAAGCC GGTTGTCCTC GATATGATCG AAGACCTGCT GGAGGGGATC
CTGGCGGAAA CCGCGGACGA GAAGCACTAT GCGGAGGACT GGGACCTGGA AAAAATCAAT
TCCGAGGTCT TGCGCCTGTT CGGGCTCCAG ATGAACCTGA CGGTCGAATC CCTGGGCGAC
ATCGAATACG AGGAGTTTCG GGATTCGCTG CTGGAAAGGC TCACGAAACG CTACGAAGCC
CGCGAGCAGG AATTCGGCGA GTCCATGATG CGGGAGCTCG AAAGCTACCT CCTGCTCCAG
ACGGTGGATA CTTACTGGAA AGACCACCTG CTCAACATGG ATCATCTCAA GGAGGGCATC
GGTCTGCGCG GTTACGGGCA GCAGGATCCG CTCATCGCCT ACAAACGGGA AGGACACGCC
CTGTTTGACG AGATGATCGA GCGGATCAAG GAGGAGACGA TACGGCTGCT TTTCCACATC
CAGATCCAAC GCGAGGAACA GCTGGATGAG CTCCGGAAGG AGCAGGAAGA CCAGCCGATG
TTTTTCGGAC CGGCCGAGGG GGCCGGGCAG AAGCCCCAGA CCAGGAAAGA TCGAAAGGTG
GGACGAAATG ACCCCTGTCC ATGCGGAAGC GGAAAGAAGT ACAAAAAGTG TTGCGGTAAG
TAG
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| Protein sequence | MLTDILKKIF GSQNERILKR IAPLVDEINS YEPVMRKLSD AALKAKTPEF KQRIANGEPL
DDLLPEAFAV AREGAVRTLG MRPFDVQMIG GIVLHEGMIA EMKTGEGKTL VAVMPIYLNA
LTGRGVHLVT VNDYLARRDS EWMGQVYKFL GLSVGCIVHG LDDPERKEAY GADVTYGTNN
EYGFDYLRDN MKFRIEDMVQ RELNYAIVDE VDSILIDEAR TPLIISGPAE KSTALYYNIN
RIIPQLKPET HYTKEEKSRT VALTEDGVTR TEKLLGVDNL YDPRQIDILH HVQQALRAHV
LFKRDVDYIV KDGKVIIVDE FTGRLMPGRR YSEGLHQALE AKENVHIENE NQTLASITFQ
NYFRMFDKLA GMTGTAETEA AEFAKIYKLE VVVIPTHRKM IREDYADCIY RTEAEKFRAV
AEEIKEAYAV KRPVLVGTVN IAKSEKLSGI LKRQGVPHQV LNAKHHEKEA EIVALAGQPG
AVTISTNMAG RGTDIVLGPG VVDVGGLHII GTERHEARRI DNQLRGRSGR QGDPGSSRFY
LSLEDDLMRI FAADRLSGLM QRIGMKEDEP IEHRLITKAI ENAQSKVEAQ NFSIRKQLLE
YDDVMNQQRE VIYRQRREAL QGENLKPVVL DMIEDLLEGI LAETADEKHY AEDWDLEKIN
SEVLRLFGLQ MNLTVESLGD IEYEEFRDSL LERLTKRYEA REQEFGESMM RELESYLLLQ
TVDTYWKDHL LNMDHLKEGI GLRGYGQQDP LIAYKREGHA LFDEMIERIK EETIRLLFHI
QIQREEQLDE LRKEQEDQPM FFGPAEGAGQ KPQTRKDRKV GRNDPCPCGS GKKYKKCCGK
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