| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1198 |
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| Symbol | |
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| ID | 4460470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1481733 |
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| End bp | 1483349 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639701965 |
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| Product | alpha-glucan phosphorylases |
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| Protein accession | YP_845326 |
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| Protein GI | 116748639 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0058] Glucan phosphorylase |
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| TIGRFAM ID | [TIGR02094] alpha-glucan phosphorylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.347146 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTG GTTACTTCAG CATGGAAATC GGCCTGAACG AGAACATTCC CACCTACAGC
GGCGGTCTCG GAATCCTTGC GGGCGATCAC ATCAAATCAG CCGCCGATCT CAACATTCCC
CTGGTGGCCG TGACCCTGCT CTACAAGCGG GGATACTTCA TCCAAAGCAT CGATCCCATG
GGGCGCCAGG AGGAGATCTA CCCGTATTTC GATCCTCGCG CCTTCATGGA GCCCCTGCCT
TTCAAGGTCA CCATCAAGAT CGAGGGGCGG GACGTGCATA TCGGGGTCTG GAAATACAAT
ACCGTGGGCA TTTCAGGACG CGTGCCGATC TATTTTCTGG ACACGGACCT GGAGATCAAC
GCCCCCGAAG ACCGTCTCAT CACCCAGTAT CTCTACGGCG GCGATACACA CACCCGGATT
TGCCAGGAAG CGGTCCTCGG AATCGGCGGA TACCTCGCCG TCAAGCGTCT CGAGCCCGGG
ATCACCACCT ACCACATGAA CGAAGGACAC GCCGTTTTCC TCACCCTGGC CCTTTTGCAG
GATTGCGGAG GAGACGAGAG CAAGGTCCGG CAGCAATGCG TTTTCACCAC TCACACCCCC
GTGCCGGCGG GCCACGACAA GTTCACCTAC GAACTGGCGA CGCGGGTGAT CGGCACCTAT
CTGCCTTCCA ACATCAAGAG ACTGGCGGGC GCCGACCTGC TCAACACCAC CGTGCTCGCC
CTCAACCTGT CCAGGGCGAG CAACGGCGTG AGCGAGCTCC ACGGGGAAAT ATCCCGCCAG
ATGTTCCCCG GATTTCCCAT CGGGCATGTC ACCAACGGGG TCCATCATCT GAGTTGGACC
GGGCCGGACT TCAAGGCCCT CTATGACGAG CATCTTCCCG GCTGGCGTCA GCAGCCGGAG
AGGCTCGCTG AGGCCCTGAC CATTCCCGAT GAAGCCGTCA AGACGGCGAA AATCAAGGCC
AAGAAACGAC TGATCAGCTA TGTCAATTCC GTTTCCGGCG CCGGCTTCAC CGACGAGATC
CTCACCATCT GCTTTGCCCG GAGGGCTGCG GCCTACAAGC GCGCCACCCT GATTTTCAGC
GACCTCGAAT TCCTTTTCAA TCTCTCGTTC GACCGCGTCC AGTTCATCTT CGCCGGCAAA
TCGCACCCAC AGGACGCCCC CGGCAAGGAG CTGATCAAGG AAATCGTGAA CACCGGCAAA
CAGTATGAAA AGAAGCTCCG ACTGGTCTTC GTGCCCAACT ACAACATCTG GTCGGCGGGA
CTCATGACCC AGGGAACGGA CGTGTGGCTC AACACACCCA GGCGCCCCCG GGAGGCCAGC
GGTACCAGCG GCATGAAGGT CTGTTTCAAC GCCGGCGTGA ATATGAGCGT CCTGGACGGA
TGGTGGCGGG AGGCGTGCAA CAACCGGGTC AACGGCTGGG CTATCGGAGA CGACGAAGAT
CAGACGGACG AACAGGCATC CGCGGATTTC TACCAGGACC TGGACGACAT GGTCACCACT
TACTACGCCA ACCCCAGGCA GTGGCTGTCC ATCATGAAAC GCTCCATCAC CGACATCACG
CCCGTGTTCA ATACGCACCG CATGGTGCGG GAGTACGTGC AAAAATATTA TCTTTGA
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| Protein sequence | MKVGYFSMEI GLNENIPTYS GGLGILAGDH IKSAADLNIP LVAVTLLYKR GYFIQSIDPM
GRQEEIYPYF DPRAFMEPLP FKVTIKIEGR DVHIGVWKYN TVGISGRVPI YFLDTDLEIN
APEDRLITQY LYGGDTHTRI CQEAVLGIGG YLAVKRLEPG ITTYHMNEGH AVFLTLALLQ
DCGGDESKVR QQCVFTTHTP VPAGHDKFTY ELATRVIGTY LPSNIKRLAG ADLLNTTVLA
LNLSRASNGV SELHGEISRQ MFPGFPIGHV TNGVHHLSWT GPDFKALYDE HLPGWRQQPE
RLAEALTIPD EAVKTAKIKA KKRLISYVNS VSGAGFTDEI LTICFARRAA AYKRATLIFS
DLEFLFNLSF DRVQFIFAGK SHPQDAPGKE LIKEIVNTGK QYEKKLRLVF VPNYNIWSAG
LMTQGTDVWL NTPRRPREAS GTSGMKVCFN AGVNMSVLDG WWREACNNRV NGWAIGDDED
QTDEQASADF YQDLDDMVTT YYANPRQWLS IMKRSITDIT PVFNTHRMVR EYVQKYYL
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