| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1195 |
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| Symbol | |
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| ID | 4460467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1478486 |
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| End bp | 1480000 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639701962 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_845323 |
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| Protein GI | 116748636 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.351924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACATC AGAAAACTTA CGACGATGCG GAGAAGATCA TGATCTGCCA GGGTGACATC
GATTACCAGG GCATCGTGAA GCACATCAAC GACGGCGTCG TCATCATCAG GGAAGGGATT
GTCGTATTTG CCAATACGGC GTTTTACGAG ATGGCGCAGC GCGGCCCGGA GGAGGTCATT
TCGGTGGATT TCGCCCGGTT CATCGCGCCG GGCAACCGGG AGGAAGTGAC GAGCTACCTT
ACCGAGCGGC TTTTCAGCGC GGGTCTTTCC GACCGGATCG AATTCGTCAT GCCGAGAACG
GATGGTGAGG CAATCATCGA AATGAAGGTG AACGTGGTGG AGTGCGGGGG GAGCCCCGCG
ATACTCGGAG CCCTGACCGA TATTACCGAG CGCCGCAAGA CCCGCCTCGA ACTGCAGCGA
ATCAAGGCGC GGTTCGAGAG CATTATCCAT TCCATGAATG AAGTCGTGGT TTCCCTGTCA
CCGACCGACT ACTCGATTCT TGCGATCAAT CCCGCCGCCG AGGCGCTCTA CGGGGTCCCG
CTCAGGGATT TTGCAAGCGG CGAGAACCAG CTCATGAGCT TCGTGCACCC GGACGACCGG
CAGAAAGTGC ATCAATTTTA CCGGAACATG CCCGAGGCGG AATTCGACGA GCTCCAGTAC
AGGGTGATCA GCAGCAACCG GAGGGTGAAA TGGGTTCGGG ATGAAGGACA CGTCGTTTAT
TCGGACAAGG GGACCATCCG CAGAATCGAT CACGTGATCA GGGATATCAC CGAGGAGAAG
AGGGCGAGCG ACGCGCTCAA GCTGAGCGAG GCGAGATACC GGGATTTCTT CGAATCGACC
AGCGATATGG CCTATGCCGT GACTCCGCAG GGAGACTTCA TCGACATCAA CGAAGCGGGT
CTGAAGCTTC TGGGCTTTGA GAGCCTCGAC GAGGCGATCG AGAGCAACGT CTCCGATTCC
TACGTGGATC TTTCGCAGAG AACCGGACTA CTGGAGGAGC TCTACGAGAA AGGCTATGTC
GAGGGAAAGC ACATCAAGCT CAAGAACAAG GCCGGCGAGG TCTTCGAAGT TGCGGTCACG
GCACGGGCCA AGACCGACGA ATCAGGGAGG CTCCTCTACT ACGACGGCAT CGTGCACAAC
ATCACCAGGG CCCTGGAAGA CCAGAGAAAC CGGGTCTTGC GCAACGCGGC GGGAGGCCTG
TGCCATTATC TCAACACACA CCTGATGCAG CTCAGCAATT CCAAGGACGC CATCGGCGAG
GAGATCGAAT CCCTGGGAAC GCTCATCGAG GAACATGCCC GCGGGGAGAA CCCGAGGGAA
ACGGCGGAAC GGATGAAGGA AATCGTGGAG AGCATGCAGT TTTTCCATGC GGGTGTTTCG
GAGGCCTACA AGAAGATTTC CGAGGTGACC ATGGCGTTCA ACAAGGCGTT CCTCTATCGC
GAAGAGTCCT ACCTGACGAG CACGATCCTC GACATCTTCA AAGCCTACGG GTACGAAGGA
GACGACTTGA AATAG
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| Protein sequence | MTHQKTYDDA EKIMICQGDI DYQGIVKHIN DGVVIIREGI VVFANTAFYE MAQRGPEEVI
SVDFARFIAP GNREEVTSYL TERLFSAGLS DRIEFVMPRT DGEAIIEMKV NVVECGGSPA
ILGALTDITE RRKTRLELQR IKARFESIIH SMNEVVVSLS PTDYSILAIN PAAEALYGVP
LRDFASGENQ LMSFVHPDDR QKVHQFYRNM PEAEFDELQY RVISSNRRVK WVRDEGHVVY
SDKGTIRRID HVIRDITEEK RASDALKLSE ARYRDFFEST SDMAYAVTPQ GDFIDINEAG
LKLLGFESLD EAIESNVSDS YVDLSQRTGL LEELYEKGYV EGKHIKLKNK AGEVFEVAVT
ARAKTDESGR LLYYDGIVHN ITRALEDQRN RVLRNAAGGL CHYLNTHLMQ LSNSKDAIGE
EIESLGTLIE EHARGENPRE TAERMKEIVE SMQFFHAGVS EAYKKISEVT MAFNKAFLYR
EESYLTSTIL DIFKAYGYEG DDLK
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