Gene Sfum_1193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1193 
Symbol 
ID4460465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1477670 
End bp1477999 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content56% 
IMG OID639701960 
Productribose ABC transporter, periplasmic ribose-binding protein RbsB 
Protein accessionYP_845321 
Protein GI116748634 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.49295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCGC TGTCGAATGC CTTTTTCGGC AGAATGAAGA CCGGCGCAAG GAATTGCGCG 
TCGCTTCGCG GGATTGCGCC GGAGGTGTTT GGAATCGAAA GGGAAAGCGA TGTGGAGCAC
CAGATTGCCA TTGTGGACAA TCTGATCGCT CGAGGCTTCC GTGCCATCGC CATCGCCCCG
GCGGATTCCA GGAAGTTGTT TCCCGTCTGC AAGAAAGCTC TGGACAAAGG CGTCATCGTG
ATCAACATCG ACAATCCCTT CCGCAAGGCG ACTTTGGCGG AGCACGGCAT ATCGATTCCT
TTCGTGGGAT CGGACAACGT CAGGGGCTGA
 
Protein sequence
MKALSNAFFG RMKTGARNCA SLRGIAPEVF GIERESDVEH QIAIVDNLIA RGFRAIAIAP 
ADSRKLFPVC KKALDKGVIV INIDNPFRKA TLAEHGISIP FVGSDNVRG