| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1192 |
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| Symbol | |
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| ID | 4460464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 1474778 |
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| End bp | 1477516 |
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| Gene Length | 2739 bp |
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| Protein Length | 912 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639701959 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_845320 |
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| Protein GI | 116748633 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.444 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGGA CGATAAACAG CAAATTCTAT CTCATAGCGG TTCTGCTGTT GTTGCTGTTC
GGCATCGGAT ACACGGAGGT GGCGATCTTT CTGGACCGGC AGGCGAAAGG CGTCCAGCGT
GGTCTCGGCG CAAGCGCGAT CGATATTGAA ATCCAGGCCC TCAAGGGCAC GTTCTGGGAG
GTCCGTTTCT GGGAGAAGGC GGTACTCGCT CAGAAACACC CCGAAGCGGA CAAGCGGTTC
GGCGAGCTCA TGCACGTCAC GCGAAAGCGT ATCGAGGAAC TCAGTCTCGG GTCTTTTTCG
AGCGTTCTGG CCGAGCCGGT TGCCAGGATC AGCCTCCTCC TGTCGGAGTA CGAGACCTCT
TTCACCCGCC TGATGCAGTT GAAAACCGAG CAGCGGATGA ATCAGACGGA TTTCGCGGCC
AACGAGCAGG CACTCGTTTC ATCCGTTCTC ATGGGCGGGG AGATGGGCCT CATGAAACCG
CTGTTCAACC TGGCCCGCTT TCACGGAAGT TATCTGCAGC ACCACCGGGA TTCGGAATAC
CAGGCCCTCG GGGCGGTTCT GGATTCGATG GCGGCAAGGC TCTCCGATTC TTCAGCCGGT
GACGGCCGCG TGAAAACGTA TCTGACAAAA TACCGCAATC ACCTGGACCG TGACTTTGCG
CTGGAGAATG AGCTCGATGT GATCAACCGG CGTTTCGACA CGCTGAGCAT CGAACTGAGC
GACCTTTTCA CGAGCATTTC AAGGAAGACC GGCGGGCTGT CGATGGCGGA GGCCCAGTCG
GTTGCCGACA TGAGGAATCT GCTCAATAAA TCGCTGTTCA TCTCGGCGGT CTGCGGCGTG
GCGATGCTGT TTCTTATTTT GCGGATCCTG GCGCGAAAAC TGGTGAATCC GATCAAGGCG
ATCTCCTCCG TTGTCTCGCA GGTCCAGGCG GGTAACCTGG ATGCGCGTTT CGTTTCCCGG
GACCGCGACG ACATCACGGA TTTGGGATTG ACCTTCAACA GCATGCTGGA CACCATCAAG
CGCAACAACC AGCACCTGGT TTCATACAAA CTCGACCTGG AAAGAAAAAT TCGGGAGTTG
GCCAACTCCG AGGAGGAACT CCGCAAGCAC CGCGATCATC TCGGAGAACT GGTGGACGAA
CGGACCGCGG AACTGGGCGC GGCCATCAAG GAACTGAAGT TGGAGATGGC GGAACGCGCA
CAGGCGGAGA AGGCGCTGCG GGAGAGTCGG GAAGTCTACC GCACGCTCAT CGAGACCATC
CCCTACGGGG TACAGGAGGT GGACCTGTCC GGGTGGATCA TTTTCACCAA CCCGGCACAC
GATGCCATCT TCGGTTATTC CCACGCCGAG ATGCTCGGAA TGAACACCAT CGATCTGGTC
ATCGAAGGGG CCGACCGCGG CCTGCTCAGG CAGTTCTTCA CCTCCGGAGC GGCCCAGCAG
CCGCCGCCGA GCACGCGCAT GTTCAGGAGC GCCACCAAGG ACGGCCGGGT CATCGATCTC
CAGGTGGACT GGAATTACAA GCGAAACGAA CTCGGAACGG TGGTGGGATT CATCTCCGTC
ATCACGGACG TGTCCGAGCG CAGAAAGCTC GAAGCCCGCC TCCGGCAGGC GCAGAAGATG
GAGGCCATAG GCACGTTGGC AGGTGGAATC GCCCATGATT TCAACAACAT TTTGACGCCC
ATCATCGGCT ACACGGAATT GGCCCTGGCG CGGATGGGCT CCGCCGAGCA CGCGCAGCGG
GATTTGCACC AGGTGCTCAA GGCGGCTCAA CGGGCCAAGG ATCTCGTGAA CCAGATATTG
GCCGTGAGCC GTCACGATCG AGAGCAGGAG CGAACGGCCG GGGATGTGAG CACGATCGTC
GAAGAGGCGC TCAAGCTCTT GAGAGCCTTG ATTCCAAGCA CCATCGAGGT CAGGCAGAAT
CTCGATCCAG GCATAGCGCT GGTGGACGCG ACTCAAATCC ACCAGGTGTT GATCAATTTG
TGCACCAACG CCTCTCATGC CATGAACGGC ACGGGAGTGC TCGACGTCAG CCTGACCGGG
GTCCAGATCG GGAACCCCGG TTCCGCGCAC ATTCCGGATC TCGATCCGGG ATCGTACCTG
CGGCTGAGGG TTGCGGACAC CGGGCCTGGA ATGGATGCGG CCACCCTGGA GCGCATCTTC
GATCCCTATT TCACCACCAA GGCGGTGGGC AAGGGGAGCG GGCTGGGACT GGCGGTCGTG
CACGGGATCG TCAAGCGACA CAGAGGTGCC GTCACGGTCC GCAGCCGCCT GGGGCAGGGC
AGCATCTTCG ACGTGTATAT TCCGAAAATC GAGGACCTGC CGAAGGAAGC GGCGGACGTC
AGCCGGGAAT TGCCCACCGG CACCGAGCGG ATACTCCTGG TGGACGACGA ACAGATCGTG
GTTGACGTGG GCACGGGGAT GCTCGAGGAA CTGGGGTATC GGGTCGAGGC CGTGACGGAC
AGCGAGCAGG CGCTGAAAAC CTTCCGGGCC AGGCCGGAAG ACTTCGATCT CATCATCACC
GACTACACGA TGCCGAACCT GACCGGGACC GGCCTTGTCC GGGAGGTCTT CAAGACGCGG
GCGGACATGC CGGTCATCCT TTGTACCGGC TTCAGCGAGC AGGTCACCGA AGAAATGGCC
AAGAGCATGG GGATCATGGA ATTCGCCATG AAGCCCCTGG ATTGGACGCG CCTGGCTCAG
ATGGTTCGTC GCGTGCTCGA CGCGCAAAAG GATTCGTGA
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| Protein sequence | MFRTINSKFY LIAVLLLLLF GIGYTEVAIF LDRQAKGVQR GLGASAIDIE IQALKGTFWE
VRFWEKAVLA QKHPEADKRF GELMHVTRKR IEELSLGSFS SVLAEPVARI SLLLSEYETS
FTRLMQLKTE QRMNQTDFAA NEQALVSSVL MGGEMGLMKP LFNLARFHGS YLQHHRDSEY
QALGAVLDSM AARLSDSSAG DGRVKTYLTK YRNHLDRDFA LENELDVINR RFDTLSIELS
DLFTSISRKT GGLSMAEAQS VADMRNLLNK SLFISAVCGV AMLFLILRIL ARKLVNPIKA
ISSVVSQVQA GNLDARFVSR DRDDITDLGL TFNSMLDTIK RNNQHLVSYK LDLERKIREL
ANSEEELRKH RDHLGELVDE RTAELGAAIK ELKLEMAERA QAEKALRESR EVYRTLIETI
PYGVQEVDLS GWIIFTNPAH DAIFGYSHAE MLGMNTIDLV IEGADRGLLR QFFTSGAAQQ
PPPSTRMFRS ATKDGRVIDL QVDWNYKRNE LGTVVGFISV ITDVSERRKL EARLRQAQKM
EAIGTLAGGI AHDFNNILTP IIGYTELALA RMGSAEHAQR DLHQVLKAAQ RAKDLVNQIL
AVSRHDREQE RTAGDVSTIV EEALKLLRAL IPSTIEVRQN LDPGIALVDA TQIHQVLINL
CTNASHAMNG TGVLDVSLTG VQIGNPGSAH IPDLDPGSYL RLRVADTGPG MDAATLERIF
DPYFTTKAVG KGSGLGLAVV HGIVKRHRGA VTVRSRLGQG SIFDVYIPKI EDLPKEAADV
SRELPTGTER ILLVDDEQIV VDVGTGMLEE LGYRVEAVTD SEQALKTFRA RPEDFDLIIT
DYTMPNLTGT GLVREVFKTR ADMPVILCTG FSEQVTEEMA KSMGIMEFAM KPLDWTRLAQ
MVRRVLDAQK DS
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