Gene Sfum_1186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1186 
Symbol 
ID4461567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1470141 
End bp1470773 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content60% 
IMG OID639701953 
ProductMethenyl tetrahydrofolate cyclohydrolase-like 
Protein accessionYP_845314 
Protein GI116748627 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3404] Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC CGTTTCTTCT CGCCCTGTCC AAACCGGAAC CCTCGCCCGG GGGGGGAGCG 
GCCGCTGCGT ACAGCGCGTG TCTGGGCCTC GCCCTTCTCA AAAAGGTGAT CAACCTCGAA
CTCCTTCGTC CGGAGGTTTC TGAAGAGCTC GTCTCCATAT GGGACGACCT GCTGGAACAG
ACGGAGGTCG CCGAGGAGAT CCTGGAGCGG CTGCTCCACG AAGATTCGAG GGCTTACGTG
GATTTTACCG AAGCAAGGTC CGGCGGCACG GAGGACTCGT TCTCCGCGGC CCTGGAAAAC
CTCATTGACT GTCCTTTCAA AATCATGGAA CAGTCCTGTC AGGGCCAGGG GCTCATTTCC
GAGGCGGGAA AGCTCTGCAA GCGATATCTT CTTTCAGACC TGCTGGTTGC GGGGGAATTC
TTCCTGGCGG CGGTGCAGGG GGCATGTCAC ATTGCACGTA CCAATCTCTA TCTTGTTCCC
GACGACCCAT CCAAGGAGGG GCCGTACGCC GGAACGAGGG ACAAGATTCT TCGGCTGCAG
AACTGCTGTC AGGACGCTTA CGACATGGTT CAGGAACAGA TCCGGCTGAG AATCAGGCTG
GGCGGGAGCG CGCCCGGCAG CCCCGCGCTC TGA
 
Protein sequence
MNEPFLLALS KPEPSPGGGA AAAYSACLGL ALLKKVINLE LLRPEVSEEL VSIWDDLLEQ 
TEVAEEILER LLHEDSRAYV DFTEARSGGT EDSFSAALEN LIDCPFKIME QSCQGQGLIS
EAGKLCKRYL LSDLLVAGEF FLAAVQGACH IARTNLYLVP DDPSKEGPYA GTRDKILRLQ
NCCQDAYDMV QEQIRLRIRL GGSAPGSPAL