Gene Sfum_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1184 
Symbol 
ID4461565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1466598 
End bp1468493 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content59% 
IMG OID639701951 
Productadenylyl cyclase class-3/4/guanylyl cyclase 
Protein accessionYP_845312 
Protein GI116748625 
COG category[S] Function unknown
[T] Signal transduction mechanisms 
COG ID[COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain)
[COG5616] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACAA ATGGTTTCAA ACGCAAGCTC GCGGCCATCC TCAGCGCCGA TGTGGCGGGG 
TACAGCCGCC TCATGGGCGA GGATGAGGCG GCAACGGTTA GGACCCTGGA AGCGTATCGG
CGGGTCATCT CGGATTTGAT CCAACAGCAT CGCGGCCGCG TGGTGGATTC TCCCGGGGAC
AACATCCTGG CCGAATTCGT CAGCGTGGTG GATGCAGTGC AATGCGCTGT CTCGGCGCAA
AAGGAGATCC AGGCCCGCAA TACGGAACTG CCTGAAAACC GGAGAATGCA ATTCCGCATC
GGAATCAACC TGGGGGATGT GATCGAAGAG GGAGATCGCA TCTACGGCGA CGGCGTGAAC
ATCGCAGCAA GGCTGGAATC CCTGGCCGAC CCCGGGGGAA TCTGTGTCTC CAAGACTGCT
TTTGAACACA TCGAGAGCAA GCTTCCGCTG GGGTATGAGT ATCTTGGGGA ACAGACCGTC
AAGAATATCG CCAAACCCAT ATGCGCTTAT AAGGTCCAGA TGGAGCGAAG GGTGACCGTG
AAGGATCATG CCGAGGCGAA GTCAAAGGGG GGCACGTGGC ATAGGCCCTT GATCGTTGCC
TTGGCAGGCG TTCTTCTGAT CACTGTGGTT GCTGCGGCAC TTTGGCAATT CGACTTTCTC
CCGGTCCGCA CGCGGGTGGA CGATACTACG GTGCAACGGA TGGCTTTCCC GTTGCCCGAC
AAGCCGTCCA TCGCGGTGAT GCCCTTCGTG AACATGACCG GAGAGCAGAG CCAGGACTTC
TTCTGCGACG GGTTGAGCGA AAGCCTGATC GCGGCCCTTT CCAGGGTGCC GGAGCTTTTC
GTCATCGGGC GGGATTCCAC CTTCATCTAC AAGGGAAGGG CGGCGCCGAT GCGGCAGGTG
AGCGAAGACC TCGGGGTGCG GTACGTTCTG GAGGGGAGCG TGCAGAGGGC CGGCGACCGG
GTACGTGTCA CGGCGCAGCT GATCGATGCC CTCAAGGGTC ATCATCTCTG GTCGGAACGC
TACGACCGGA ACGTCAAGGA CATTTTCGAG CTGCAGGACG AGATCTCCAT GAAGATCCTC
ACCGAACTTC GCGTGAAGAT CACCGAGGGC GAAGCAGCTC GCATACTGCC GAAGGGAACG
AACAACCTGC AGGCCTACCT GAAGGTTCTC GAAGGGGAAT GGTACAGGAA TCAAAACAAC
AAGGAAGCGA ACAACGTGGC AAAACGGCTA TACCACGAAG CCGTGGAACT GGACCCGGCT
TACGCGATGG CTTATGTTGG CTTGGCCAGG GCGCAGGGGT TCGATGTATG GCTCGGCGCC
AGCAAATCGC CCAAAGAGAC TCTCGCCGAT GCAATGAAAT CAGCCCGGAA GGCGATCGAA
TTGGACGATT CCTCAGCTGA GGCCAATGCC GCAGCCAGCG CGGTCCTTGT GGCAATGCGC
GAGCATGAGA AGGCGATAGA GGTTGGAGAG CGGGCTGTGA CGCTCAACCC CAACAGTGCC
AATGCCCTCT ACACCCTTGG TATGGTTCTG AACTATGCCG GGAGGAGCGA AGAAGCCCTT
CCTCTGCTTC GACAGGCTGT TCGATTCAAT CCCGTCGTCC CGAAGTACTA CCACCATTTC
AGCACCGCTT GCCGCGAAAC CGGGCGGTAT GAAGAGGGGA TCGCCGCACT GAAGACATCA
CTTGGTCGAG TCCCCGACGA TGTTCTTGCA AACGTTGTTC TGGCGACTCT TTATGTGTAC
GCAGGGCGTG AAGATGAGGC GCGGGCCGCC GTCGCGGAAG TCCGCCGCAT AGACCCCGGG
TTCTCCCTGG AAAGGTTCGC AAGGGGGTCC CCGTGGAAAG AAGGGCCAAA GAGGGATCGC
TTCATTGACG CCCTCCGCAG GGCGGGGCTG AAGTAG
 
Protein sequence
MGTNGFKRKL AAILSADVAG YSRLMGEDEA ATVRTLEAYR RVISDLIQQH RGRVVDSPGD 
NILAEFVSVV DAVQCAVSAQ KEIQARNTEL PENRRMQFRI GINLGDVIEE GDRIYGDGVN
IAARLESLAD PGGICVSKTA FEHIESKLPL GYEYLGEQTV KNIAKPICAY KVQMERRVTV
KDHAEAKSKG GTWHRPLIVA LAGVLLITVV AAALWQFDFL PVRTRVDDTT VQRMAFPLPD
KPSIAVMPFV NMTGEQSQDF FCDGLSESLI AALSRVPELF VIGRDSTFIY KGRAAPMRQV
SEDLGVRYVL EGSVQRAGDR VRVTAQLIDA LKGHHLWSER YDRNVKDIFE LQDEISMKIL
TELRVKITEG EAARILPKGT NNLQAYLKVL EGEWYRNQNN KEANNVAKRL YHEAVELDPA
YAMAYVGLAR AQGFDVWLGA SKSPKETLAD AMKSARKAIE LDDSSAEANA AASAVLVAMR
EHEKAIEVGE RAVTLNPNSA NALYTLGMVL NYAGRSEEAL PLLRQAVRFN PVVPKYYHHF
STACRETGRY EEGIAALKTS LGRVPDDVLA NVVLATLYVY AGREDEARAA VAEVRRIDPG
FSLERFARGS PWKEGPKRDR FIDALRRAGL K