Gene Sfum_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1178 
Symbol 
ID4461559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1458311 
End bp1459630 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content64% 
IMG OID639701945 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_845306 
Protein GI116748619 
COG category[C] Energy production and conversion 
COG ID[COG1148] Heterodisulfide reductase, subunit A and related polyferredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.60984 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACA GCGAAGTCGA ACAGGTGAGT GGAGAAGCGG GTTCCTTCAA GGTCAAGGTC 
CGCAAGAAGG CGCGGTTCGT CAAGGAAGAC TGTTGCACGG GCTGCGGCGC CTGCGCGGAG
AAGTGCCCCA CGGCCGTGGT GGACGCCTAC AACGCCGGGA TGGGGAGCCG CAAGGCGATT
TACAAGTACT TCCCCCAGGG GATTCCATCG GTTTTCACCA TCGATGCGGC CGCATGCCGG
CAACTGGGCC AGGGGAAGAA GTGCGGCGTC TGCGCCAAGG TGTGCCAGGC CAACGCCATC
GATTACGAAC AGAAGGACCG GGAGCTGGAA ATCGAGGTCG GAGCCGTCAT CCTCGCCACC
GGATACGAAG TGTTCGACCC TTCGGTGATG CCGGAATACG GCTACGACCG GATCCCCAAC
GTCGTGACTG CGCTCGAGTT CGAACGGCTG TTGAGCGCCA GCGGACCCAC GGCGGGCCAC
CTGGAGCGGC CTTCAGAAAT CGCCCTGGAG AAGGACATCG AAGACGCCGA GAAAGAGGTG
AAAAAGCTGG GGCGCCAGGT GAAGCAACTG GAAGACAAGC ACGGCAAGGC CTCCGCCGAG
ATCGCGGGGC TGGTTGCATC GGGCGCCGCA TCCGATGAGG AGAGCAGGCA GTGGGCGGAG
TCGGCCGGGA AGCTCGAAAG CCTCGAGGCG GAGCTCGCGA CGATGCGGGC AAGAAAAGCC
GCCGCTCAGA CCGCCAAGCG CCTGGCCTTT ATCCAGTGCG TCGGCTCCCG GGACTTCCGG
CACAACCGCT TCTGCTCATC TTATTGTTGC ATGCACTCGG TGAAGGAGGC CATGATCGCC
CACGAACACG ACAACGAAGT CACGTCGTCG ATCTTCTGCA TGGACCTGCG AGCCGTCGGG
CGCGGGTTCG AGGAATACAA GCTGCGCGGC GGCAAGCAGG CCAATATCCG CTACGTGCGC
GGCCGGGTCG CCGAGATCAC CGAGGGTGAA GGAGAAAACC CCGTGGTCTG GTTTGAATCC
ACCACGCAGC AGCAGGTGAT CGGGGAGTCC TTCGATATGG TGGTGCTGGC GACCGCCTGC
GTGCCTTCCG TGAGCACACG GCCGCTGGCC GAAATGTTTG AAGTGGAACT GGACGGGAAC
GGCTTTTTCA AGACGGACCC GCTGGCTCCG CTCAACACGA CGCGCCCCGG CGTTTTCGTG
TGCGGCTGCG CGCAGGGACC GATGGACATT CCGGAGTCGG TGGCCCAGGC CAGCAGCGCA
GCGGCCAAGG CCGCCGAGAT TGTGGCGCCT GCAAGGCAGG CTGCGGCGGC AGGACAATGA
 
Protein sequence
MAYSEVEQVS GEAGSFKVKV RKKARFVKED CCTGCGACAE KCPTAVVDAY NAGMGSRKAI 
YKYFPQGIPS VFTIDAAACR QLGQGKKCGV CAKVCQANAI DYEQKDRELE IEVGAVILAT
GYEVFDPSVM PEYGYDRIPN VVTALEFERL LSASGPTAGH LERPSEIALE KDIEDAEKEV
KKLGRQVKQL EDKHGKASAE IAGLVASGAA SDEESRQWAE SAGKLESLEA ELATMRARKA
AAQTAKRLAF IQCVGSRDFR HNRFCSSYCC MHSVKEAMIA HEHDNEVTSS IFCMDLRAVG
RGFEEYKLRG GKQANIRYVR GRVAEITEGE GENPVVWFES TTQQQVIGES FDMVVLATAC
VPSVSTRPLA EMFEVELDGN GFFKTDPLAP LNTTRPGVFV CGCAQGPMDI PESVAQASSA
AAKAAEIVAP ARQAAAAGQ