Gene Sfum_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1170 
Symbol 
ID4461551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1450343 
End bp1451245 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content63% 
IMG OID639701937 
Productsporulation domain-containing protein 
Protein accessionYP_845298 
Protein GI116748611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGA AGAAGAGACT TTTCGTAAAA AAGAATCCCC AATCCGGGGA TCGCTCCTCT 
TTGAGGGTCT TCATCTGGGC CGGCGTTGCG CTGGTCCTGC TGTTGGTGGT CACGCCGCTC
GTTCTTCGCC AGAAGGACGA CAGGAACGGC GTCAGGCCGC CCACGGAGAA GGCAAAAGTG
GTCAAGAACA TTCCCAAGGC TTTCGCACCG CCGACGGGCG GCTCGGCGCA GCCGCCCGGA
GCTGCTGACG AATACCCGCG CGGTCCCGCC TCTGTTCAGG GTGCGCTTCC CGATACCGGG
TCGTCATCCG GGCCCGCTGT TGTCCCGGAA CCGGGGACCG TCGCTCCGAA GGTGGCCGAC
GGAACTGAGG CCCTGCCGGC AAAACCGATG ACGCCGCAGC CGTCCGAACC CGTCCCGGCG
GAGCCTGCGC CCTCTGTCGT GCCGCGGCAG CCGGTGGAAC CCGCTCCTGC CGCCGGCGGT
GTCCGGGAAA GAGAATCGAC CGGTCAGCCC AAACCCGGTC CGGCCGCCAT GCCTGCGGGC
GATTCCGGGC AGCGGACGGC TTCGATCGTT CCCGATGCCC GGGAGCTGAA AAAGCTGCCC
CCGGGTGTGG CTCCTCCCCT CACTCCCGAT GCATCCGGCG CTCGGAAACC ATCCCCTGTG
CGAAAGGGGA AGTATGCCGT CCAGGTGGGA GCGTTCAAAG AGAAGAAAAA CGCCGACGAA
ATGCAGCGGC AACTTCAGAA GAAAGGTTAC CAGGCGGAAA TCAAGATCAG CTCCAATCGC
GATCTGGGCC AGCTCTACGT GGTCGTCCTC AAACCGGTCG AAAGCCTTTC CAGGGCCAAC
ACCCTTATGG AACAGATAAA GCACGAAGAG AAGGTGAAGC CGATGCTCAT CGAATCCCGG
TGA
 
Protein sequence
MSQKKRLFVK KNPQSGDRSS LRVFIWAGVA LVLLLVVTPL VLRQKDDRNG VRPPTEKAKV 
VKNIPKAFAP PTGGSAQPPG AADEYPRGPA SVQGALPDTG SSSGPAVVPE PGTVAPKVAD
GTEALPAKPM TPQPSEPVPA EPAPSVVPRQ PVEPAPAAGG VRERESTGQP KPGPAAMPAG
DSGQRTASIV PDARELKKLP PGVAPPLTPD ASGARKPSPV RKGKYAVQVG AFKEKKNADE
MQRQLQKKGY QAEIKISSNR DLGQLYVVVL KPVESLSRAN TLMEQIKHEE KVKPMLIESR