Gene Sfum_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1168 
Symbol 
ID4460246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1448757 
End bp1449338 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content55% 
IMG OID639701935 
Productpyruvate ferredoxin/flavodoxin oxidoreductase 
Protein accessionYP_845296 
Protein GI116748609 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAT ACGAGATCAG GCTGAGCGGT TCGGGAGGAC AGGGACTGAT CGTAGCCGGC 
ATCATACTTG CCGAAGCCGC TGGAATCTAT GACGGGAAAT TCGTCTGTCA GACACAGAGT
TACGGGCCTG AAGCAAGAGG CGGCGCGAGC AAGTCGGAAG TGGTCATCAG CGACGAGGAG
ATCGACTACC CCAAGGCGGT CAAGCCCGAT CTTTTGCTGG CGATGAGCCA GAGGTCCTGC
GATGCCTTCT TCTTCGACCT GAAACCGAAC GGCATACTGA TCGTGGATTC GACGTTCGTG
AAACAGCTGC CGACGAACAT CGCCATGGGC ATTCCTTTTA CCCAGCTTGC AAGAGAGAAG
CTGGGCAAAG AGATGGTGGC CAACATCATC GCCCTGGGTG CTCTGGCCAC TATCAGCGGA
GTGGTTTCCC TCAACAGTCT GGAAGCGGCG GTACTGAACC GTGTTCCCGC CGGAACGGAA
CAATTGAACA AGAGTGCGCT GGCACAGGGC ATCGAGGCTG CCAAGCTGGT TTTGCAGGAG
AAGGCGGACA GACAATCCTA TGAGAATTTT ATTGACCAAT GA
 
Protein sequence
MTRYEIRLSG SGGQGLIVAG IILAEAAGIY DGKFVCQTQS YGPEARGGAS KSEVVISDEE 
IDYPKAVKPD LLLAMSQRSC DAFFFDLKPN GILIVDSTFV KQLPTNIAMG IPFTQLAREK
LGKEMVANII ALGALATISG VVSLNSLEAA VLNRVPAGTE QLNKSALAQG IEAAKLVLQE
KADRQSYENF IDQ