Gene Sfum_1166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1166 
Symbol 
ID4460244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1446615 
End bp1447760 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content61% 
IMG OID639701933 
Product2-oxoglutarate ferredoxin oxidoreductase subunit alpha 
Protein accessionYP_845294 
Protein GI116748607 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.983155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCTA TCAAGAGTCC CGGGCGTCAG CTTCTGCTGC AGGGCAACGA AGCCATCGTG 
GAGGGAGCCC TGGCCGCCGG TTGCCGATTT TTTGCCGGCT ATCCCATCAC TCCCGCAACG
GAAATCAGTG AGGCGATGTC GTACCGGCTG CCGGCCGTGG GCGGCACATT CATCCAGATG
GAGGATGAGA TCGCGAGCCT CGGAGCGGTT ATCGGGGCGT CGCTCGCCGG TGCCAAGGCG
ATGACGGCCA CCAGCGGCCC CGGGTTTTCG CTGATGCAGG AGAATCTGGG TTTCGCATGC
GCAGCCGAAG TTCCGTGCGT GATTGTGAAT GTCATGAGGG GTGGACCGAG CACGGGACTG
CCGACCAACG TGAGTCAGGG GGACCTGATG CAGGCGCGCT GGGGGACTCA CGGGGATCAT
CCCATCATCG TTCTTGCCGT TTCCACCACT CAGGACTGCT TCGGCATCAC CTTGAAAGCC
TTCAATCTGT CCGAGAAATA CCGTACTCCG GTCATTATCC TGGCGGACGA AGTGGTCGCG
CATACGCGGG AAAAGATTCA CCTTCCACAC CCCGAACAAC TCGAAGTGGT CGATCGCATC
CGTCCCAACA TGCCCCCGGA CTGGTACATC CCCTACGAAG ACAACAGCCG CGGAGTCCCC
CCGATGAGCG CGTTCGGAGA CGGCTACCGC TATCATGTCA CGGGGCTGGT CCATGATGTA
AGGGGTTTCC CGACGCAGCG CCCGGACGAA ATCGTCGCAT TCATGAACCG TCTTTTCCGC
AAGATCAACC AGCACTTCAT GGACATCCAG CTGGTGGAGG AGGAATTGAC GGCGGACGCC
GAAGTGGCGG TGATCGCCTA CGGGTCGGTG TCGCGATCGG CGCGCAGGGC CGTGCGCGAG
GCACGGGAAC GCGGCGTCAA GGCGGGCCTG ATTCAGGTCG TCACCATATG GCCTTTCCCG
CGCCAGGCGC TGGAACCCGT GCTGCGACGG GTCAAAGCGG TTCTGGTGCC CGAAATGAAC
ATGGGACAGC TTTCCCGCGA AGTGAAGCGA ATCAACCAGG GGATGACGCG GGTCGAAACG
CTGAACCGCA TCGACGGGAA CCTGATCACT CCCCAGGAGA TCCTCACCCG GCTGATGAAA
CTGTGA
 
Protein sequence
MTAIKSPGRQ LLLQGNEAIV EGALAAGCRF FAGYPITPAT EISEAMSYRL PAVGGTFIQM 
EDEIASLGAV IGASLAGAKA MTATSGPGFS LMQENLGFAC AAEVPCVIVN VMRGGPSTGL
PTNVSQGDLM QARWGTHGDH PIIVLAVSTT QDCFGITLKA FNLSEKYRTP VIILADEVVA
HTREKIHLPH PEQLEVVDRI RPNMPPDWYI PYEDNSRGVP PMSAFGDGYR YHVTGLVHDV
RGFPTQRPDE IVAFMNRLFR KINQHFMDIQ LVEEELTADA EVAVIAYGSV SRSARRAVRE
ARERGVKAGL IQVVTIWPFP RQALEPVLRR VKAVLVPEMN MGQLSREVKR INQGMTRVET
LNRIDGNLIT PQEILTRLMK L