Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1158 |
Symbol | |
ID | 4460236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1436036 |
End bp | 1436926 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639701925 |
Product | UspA domain-containing protein |
Protein accession | YP_845286 |
Protein GI | 116748599 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACATAA GGAAGCTTTT GTTTGCCACG AAATTCGACG AGATGAACCT CGAGGCGCTC AAATCCCTCC TGGATCTCAA GTTGGCCGGG TTGGAGGAGA TCCTTCTGAC ACATATTATT CCGCGCGATG AGGTGGCTTT TGTGGCGTAT GGAGGCTACC TGAAAGACGA GGCAGAGCGC TTGCGCGTGG AAGCCGGGAT TCGCTTCGAA GACTGGCGGG ATGACCTCGC CAGGGCGGGA GTGAAAGTAA AGGTCGTCAT CGAGGTGGGA GATCCCGTGC CGCAAATCAT GAAGCTTGCG GAAGCGGAGC GGGTGGACCT CATCGCGTGC GGCGGCACCC GGCGGACGGG TATCGAAAGG ATCTTCGCGG GTTCCCACAC GCTTGAATTG ATGAGGAGGA CCAGGAAGAT ACCCATCTTC GTCACCAAAC ACATGGTGAT CTGCGACACG GAGGGTGAAT GCATCAAACG TCTCAATGAG CATCCCTTTC AGCGGCCGCT GTTTGCCGCC GACTGGTCCC TGCCTTCGGA ACATGCCCTG CAGTTCATCA TCGCTTTCAA GCATGCCGTC AGGAAGGTGG ACCTGGTCCA TGTCGAGGAG GTGAAGATAT CCAAGGATCA GGGGGCATCG GAATGGCAAC GGATCGAAGC CGAAAGCAGG AACCGCCTCG ACCGCTTGTG CGAAATCCTG AGGCAGGCGG GGATCGAAAG CGAGCCGCAT CTTGCCGCCG GGGACAAAGT CTCGGAAATT CTACGGCTGA GCGACGAGCT CAACTCCACC ATGACCATTC TCGGCACCAC CGCGAAAGAC CGGATCCAAG CCTTTTTTCA GGGCAGCCTG TCCCAGGAGG TGGCCCAGGC GTCGGAACTT CCGACCCTGC TGATCCCGTA G
|
Protein sequence | MNIRKLLFAT KFDEMNLEAL KSLLDLKLAG LEEILLTHII PRDEVAFVAY GGYLKDEAER LRVEAGIRFE DWRDDLARAG VKVKVVIEVG DPVPQIMKLA EAERVDLIAC GGTRRTGIER IFAGSHTLEL MRRTRKIPIF VTKHMVICDT EGECIKRLNE HPFQRPLFAA DWSLPSEHAL QFIIAFKHAV RKVDLVHVEE VKISKDQGAS EWQRIEAESR NRLDRLCEIL RQAGIESEPH LAAGDKVSEI LRLSDELNST MTILGTTAKD RIQAFFQGSL SQEVAQASEL PTLLIP
|
| |