Gene Sfum_1157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1157 
Symbol 
ID4460235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1434565 
End bp1436022 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content59% 
IMG OID639701924 
Producthypothetical protein 
Protein accessionYP_845285 
Protein GI116748598 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1055] Na+/H+ antiporter NhaD and related arsenite permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.779838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGTG GAGAACGGCT GACGTTCATT TTCTCGCTGA TATCCTTGTC GCTCTGTCTG 
GCAGGAACCG CGTCGCCGGC GCTGGCATCG GGGCCGGGTG GCGGCGACGG AGGCGGCCTG
GGCGAGCGAC TCCCCATCTA CAGCGGGCTG CCCTTTGTGG GAATGCTCCT GTCCATTGCA
TTGATGCCCC TTTTCATGCC GAGGTTCTGG CACCACCATT TCGGGAAGGT CGCCGTTTTC
TGGTCGCTGT TGACCGCCAT CCCCATGGTG GCGGCGTACG GCGGGACGGC GGGATTTGAG
TTTTACCACG TGATGATCGC CGACTACGTG CCGTTCATGA TCCTTCTCTG GGCGCTCTTT
ACGGTCTCGG GAGGCATCCT CCTGCGGGGA ACGCTTAGGG GAACCCCGGC GGTGAACAGC
TTCATGCTCC TCATCGGCAC CGTGCTCGCC TCGTGGATGG GCACCACCGG GGCGGCGATG
CTGATGATCC GGCCATTTCT GCGGGCCAAC AACTACCGCA GGAACCGTAG TTTCATGGTG
GTCTTTTTCA TTTTCCTGGT GGCCAATATC GGCGGCTGCC TGACCCCACT GGGAGACCCG
CCCTTGTTCC TGGGATTCCT CCACGGGGTC CCCTTCACCT GGACCTTCAA CCTCCTCCCG
GAAATGCTGG TGGTGGTTGC GATCGTTCTG GGCATGTATT TTCTCCTGGA CTTCTACATG
TACAAGAAAG AGGGCGTGAC CCCGCCGGTC GAAGAAGACG CCAAGGAGCC TCTGCGCCTG
GACGGATCAC TCAATTTCCT GTTTCTGGCC GGCATTGTCG GGGCGGTTCT CATGAGTGGG
CTGGCCGACT GGGGTTCGGT CGATATTTTC GGCGCTCATT GTACCGTCGC GGACATGGTT
CGTGACGGGA TCCTGGTCCT CATGGGAATT CTGTCGCTCC TGACAACGGC AACGAATGTC
AGGGAAGACA ACGACTTCAC CTGGGCTCCC ATCCTGGAGG TCGGATACCT GTTCGCGGGT
ATTTTCATCA GCATGGTGCC GTGCCTCCTT GTTCTCAAGG CCGGGTCGAA GGGCGCGGCG
GATTTTGTCA TCGAGGCCGT CAGGGAGCCG GCCCACTTTT TCTGGGCCTC CGGAATCCTC
TCGAGCTTCC TGGACAATGC TCCCACCTAT CTGACCTTCT TCAGCACCGC GCTGGGCAGA
TTCTACCCGG GAATGCCGGA GTCAGTGGCG GTGCCTCGGT TTATCGCCGA GAACGCGATC
TACCTCAAGG CCATCTCGTG CGGAGCGGTT TTCATGGGAG CCAACACCTA CATCGGCAAT
GCGCCCAACT TCATGGTAAG ATCCATTGCC GAGGAAGCGG GGACCCCCAT GCCGAGCTTC
TTCGGGTACA TGTTCAAGTA TTCTATTCCC GTTTTGTGCA CGACTTTCGT TTTGGTCACC
CTTATCTTCT TCCAATAA
 
Protein sequence
MHRGERLTFI FSLISLSLCL AGTASPALAS GPGGGDGGGL GERLPIYSGL PFVGMLLSIA 
LMPLFMPRFW HHHFGKVAVF WSLLTAIPMV AAYGGTAGFE FYHVMIADYV PFMILLWALF
TVSGGILLRG TLRGTPAVNS FMLLIGTVLA SWMGTTGAAM LMIRPFLRAN NYRRNRSFMV
VFFIFLVANI GGCLTPLGDP PLFLGFLHGV PFTWTFNLLP EMLVVVAIVL GMYFLLDFYM
YKKEGVTPPV EEDAKEPLRL DGSLNFLFLA GIVGAVLMSG LADWGSVDIF GAHCTVADMV
RDGILVLMGI LSLLTTATNV REDNDFTWAP ILEVGYLFAG IFISMVPCLL VLKAGSKGAA
DFVIEAVREP AHFFWASGIL SSFLDNAPTY LTFFSTALGR FYPGMPESVA VPRFIAENAI
YLKAISCGAV FMGANTYIGN APNFMVRSIA EEAGTPMPSF FGYMFKYSIP VLCTTFVLVT
LIFFQ