Gene Sfum_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1155 
Symbol 
ID4460233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1432291 
End bp1432998 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content57% 
IMG OID639701922 
ProductMgtC/SapB transporter 
Protein accessionYP_845283 
Protein GI116748596 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.496718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGACT GGCAGGAATC CTTGATCTGT TTAGGCAAGC TCGTGCTTGC CGCCCTTCTG 
GGGGGAGCCG TCGGTTTCGA ACGCGAATCC CATGGGCAGT CCGCCGGGCT GCGAACCAAC
CTGCTGGTTG CCATGGGTTC GTGCCTCATG ATGATGCTCT CCTTACACAT GGAAGAGCTT
TTCATCGATC TCGACATCAA TTCGGTCGTG CGTGTCGATC CGGGCAGGAT CGCCTCTTAC
GCCATCGCGG GCATGGGCTT CCTGGGTGCC GGAGCCATCA TCAAGGGCAA AGGCACGGTG
AGGGGTCTCA CAACGGCCGC GGGCTTGTGG CTCAATACGG GAATCGGCCT GGCCGTCGGC
GCGGGGTACC TGCTTCCCGC AATTTACACG ACGCTCATCA GCCTGCTCAT CCTCTATAAT
CTTCGCTTCC TGAAAATCGT CTTCGCCCAC GACGAGTTCA CCGTGCTTAC CCTGACCTGT
TTCAGCTCGG AACAGCCCCT CAAGAAGATA CGCCGTATCA TCGCCGAGTT TCCCGAGTTC
AATTTGATCT TCATCAATTA CAGGCACCAC ATCGCCTCGC AGACGGTCAC CTATCGCCTG
CGTTTGAGCA GCAAGGGAAA TGCTCGCTTC GGAATGATCG TGGGAAAACT GCAACGAGAA
GTGCCCGGCC TGAGGGAAAT AGCGTGGGAA GAAAGCGATG TGCCTTGA
 
Protein sequence
MFDWQESLIC LGKLVLAALL GGAVGFERES HGQSAGLRTN LLVAMGSCLM MMLSLHMEEL 
FIDLDINSVV RVDPGRIASY AIAGMGFLGA GAIIKGKGTV RGLTTAAGLW LNTGIGLAVG
AGYLLPAIYT TLISLLILYN LRFLKIVFAH DEFTVLTLTC FSSEQPLKKI RRIIAEFPEF
NLIFINYRHH IASQTVTYRL RLSSKGNARF GMIVGKLQRE VPGLREIAWE ESDVP