Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_1154 |
Symbol | |
ID | 4460232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 1431395 |
End bp | 1432009 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639701921 |
Product | XRE family transcriptional regulator |
Protein accession | YP_845282 |
Protein GI | 116748595 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0376883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.48606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTACAGA CAAATGACGA AGACATCAGC ATTGCGGTCA AGGCTTTCAA CATCGGGAAC AAAGTCAGGG AGCTCCGGCA GAAGAATCAT CTGACACTTC AGGACCTGGC CGTCAAGACG GGCCTCTCCA AACCGTTCCT CTCACAAATC GAAAACAATA AGGTCGTCCC TCCGGTGGCG ACGCTGTTCA GGCTTGCCCG GGCTTTGAAG GTGGCCCTGG GGCATTTTTT CCAGGAAAGC GTTGAAGACG ACAGGATCGC CATCACCAGG AAGAAGGAGC GCGTGCGCCT GGACAGGAGA CCTCACCAGG AGAAGGGGCT GGTTCATTAT ATTTATACCG CTCTGGAGAC CAAGAAATCG AACAAGAGCA TGGAACCGTT TCTCGTGGAA TTTCCGACCC AGGAGAAGGA GGAGATGGTC TTCCTGAGCC ACGAGGGAGA GGAGTTCCTG TATGTGATGG AAGGACAGGT CGAGTTCAGG ACTCTCGACC GGGTGGAAAC CTTAGACCCC GGCGACAGCA TCTATATCGA ATCCGAGCTC AGCCACAGTT TCAGGCGTGT TGGCAATGAA ACGGCCCGGG CACTCGCCGT GGTGTGCAAA CGGCACGCGT ACTGA
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Protein sequence | MVQTNDEDIS IAVKAFNIGN KVRELRQKNH LTLQDLAVKT GLSKPFLSQI ENNKVVPPVA TLFRLARALK VALGHFFQES VEDDRIAITR KKERVRLDRR PHQEKGLVHY IYTALETKKS NKSMEPFLVE FPTQEKEEMV FLSHEGEEFL YVMEGQVEFR TLDRVETLDP GDSIYIESEL SHSFRRVGNE TARALAVVCK RHAY
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