Gene Sfum_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1154 
Symbol 
ID4460232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1431395 
End bp1432009 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content55% 
IMG OID639701921 
ProductXRE family transcriptional regulator 
Protein accessionYP_845282 
Protein GI116748595 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0376883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.48606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTACAGA CAAATGACGA AGACATCAGC ATTGCGGTCA AGGCTTTCAA CATCGGGAAC 
AAAGTCAGGG AGCTCCGGCA GAAGAATCAT CTGACACTTC AGGACCTGGC CGTCAAGACG
GGCCTCTCCA AACCGTTCCT CTCACAAATC GAAAACAATA AGGTCGTCCC TCCGGTGGCG
ACGCTGTTCA GGCTTGCCCG GGCTTTGAAG GTGGCCCTGG GGCATTTTTT CCAGGAAAGC
GTTGAAGACG ACAGGATCGC CATCACCAGG AAGAAGGAGC GCGTGCGCCT GGACAGGAGA
CCTCACCAGG AGAAGGGGCT GGTTCATTAT ATTTATACCG CTCTGGAGAC CAAGAAATCG
AACAAGAGCA TGGAACCGTT TCTCGTGGAA TTTCCGACCC AGGAGAAGGA GGAGATGGTC
TTCCTGAGCC ACGAGGGAGA GGAGTTCCTG TATGTGATGG AAGGACAGGT CGAGTTCAGG
ACTCTCGACC GGGTGGAAAC CTTAGACCCC GGCGACAGCA TCTATATCGA ATCCGAGCTC
AGCCACAGTT TCAGGCGTGT TGGCAATGAA ACGGCCCGGG CACTCGCCGT GGTGTGCAAA
CGGCACGCGT ACTGA
 
Protein sequence
MVQTNDEDIS IAVKAFNIGN KVRELRQKNH LTLQDLAVKT GLSKPFLSQI ENNKVVPPVA 
TLFRLARALK VALGHFFQES VEDDRIAITR KKERVRLDRR PHQEKGLVHY IYTALETKKS
NKSMEPFLVE FPTQEKEEMV FLSHEGEEFL YVMEGQVEFR TLDRVETLDP GDSIYIESEL
SHSFRRVGNE TARALAVVCK RHAY