| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1153 |
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| Symbol | |
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| ID | 4460231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1430198 |
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| End bp | 1430965 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639701920 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_845281 |
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| Protein GI | 116748594 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00899348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.812865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAG AATGCTTTTA CCACCCTCTG TGGCCGATCA TCTACGAAGA CAATCACCTG
CTCGGTCTTT ATAAACCAGC GGGCCTGCTC GTTCAAGGAG ATCGGACCGG GGAGGCGTCG
CTCCTCGATC TCGGCAAGAA ATGGCTCAAG GAGTGCTGTG GGAAGCCCGG CAAAGTATTT
CTCGCCATGG TGCACCGGCT GGACAGACCT GTTGCCGGCG TCGTCCTCTT TTGCCGCACA
TCCAAAGCAG CGGCCAGAAT CAGCGCGCAA TTCCGTTCGG GCCGGATTCG GAAGCACTAT
CTTGCCGTCG CGGAAGGGGA CGTCACACCC TCCGCCGGCC GCCTGGTGAA CCAGCTTGAA
AGGCACGACG AACGGTCCAG CGTCATCGTT GCGGAAGCGA CTCCGCGAAG TCGGGAAGCC
CGGCTGTCCT ACCGGGTGCT GGATGTGGCC GGCTCCCGGA GCCTCTTGGA AATCGAACTG
GAAACCGGAA GGCACCATCA GATCCGCCTC CAGCTCGCCC ACCTGGGCTT CCCCATCCTC
GGAGATCTGC GGTACGGTGC GTCCGCTCCC CTGCCCGGCC GGCAGGTGGC ACTCTTCGCG
ACGCAACTCG AACTGGAACA CCCCACTCGA AAAGAGAGCC TGCTGCTGCG CTGCCCTTTG
CCCCAATCCT GGCCCTGGCC GTCCACCCGC GAGGAGACGG GTGCCCCCCC CTGGAACTGG
TCCGAGCTCG AACCATTGCT CGATCCCGGT TCAGGCACCT CGATGTGA
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| Protein sequence | MKTECFYHPL WPIIYEDNHL LGLYKPAGLL VQGDRTGEAS LLDLGKKWLK ECCGKPGKVF
LAMVHRLDRP VAGVVLFCRT SKAAARISAQ FRSGRIRKHY LAVAEGDVTP SAGRLVNQLE
RHDERSSVIV AEATPRSREA RLSYRVLDVA GSRSLLEIEL ETGRHHQIRL QLAHLGFPIL
GDLRYGASAP LPGRQVALFA TQLELEHPTR KESLLLRCPL PQSWPWPSTR EETGAPPWNW
SELEPLLDPG SGTSM
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