Gene Sfum_1136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1136 
Symbol 
ID4460214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1413318 
End bp1414346 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content58% 
IMG OID639701903 
Productextracellular solute-binding protein 
Protein accessionYP_845264 
Protein GI116748577 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGGCA ATTTTTCCTC CCGCCACGAG GAGTTCGCAT GTGCATTCGA TCCTCCGCAG 
GGGAGCTTTC TCACCCCACA GGAGATCGAA TGGCTGGCCG CTCACCCTCT CATCAACCTC
GCCCCCGACC CCGATTACCC GCCCATCGAG TTCTTCGATG AACGGGGAAA CTACGGCGGC
ATTGCCGCCG ATTATGTCAA AATCATCGAA ACCACCCTCG GCATCGATTT CAACATCGTA
AGGATTTCCA ACTGGTCGGA TATCCTGGTT GCAGCCAGGA ACCGGACCGT GGACATGTTC
GGCGCCGCCT CCGCGACGCC GCAAAGATCC GTTTACATGC TGTTCACTTC GCCTTTCATC
GAATTTCCCT CAGTGATCAT CGTCCGGGAG AACGTCGCGG AATCCTTGAC GCCCAAGCAG
CTCGAAGGGA TGAAGGTCGC CGTTGTGGAC GGATACGCCG ACCATGATTT TCTGGTGAAT
CACTACCCCG AGCTCAAACT GATCCCCGTT CCGGACGTGA GCACGGGTTT GAGACAGGTG
TCCTTCGGCA CCGTCGACGC CTTTGTGGCC AATCTTGCGA GTGCCGTCTA CCACATTGAG
AAACTGGGCA TCTCCAATCT GCATTTCGGC GGGAACACAG GATATTCATA CCGGATGGCG
TTAGCCGTGC GGAGCGACTG GCCCGAGTTA TCGGGCATCC TCGAGAAGGC ATTGTCCCGC
ATCGGTCAAA GAGAACGCGA CCTCATTTAC AGAAAATGGA TACGGTTCGA GACTCCGTCG
CCGTTCCGGA AAACGAGCTT CCGGGCCTGC GTGCTCACCG CTCTTGCGAT CGTGCTGGTA
CTGCTTCCCG CGATGGTGGT ATGGAACAGG CTTCTCAAGT CCCTGGTCAA CAGCAAGACG
GAGGCGTTGC GCGAGGAGAT CGCCAAACGC ATCAGGACGG AAGAGCAACT CAGGCGGGCG
CGCGATGAAC TGGAAAAGCG CGTCCGGGAG AGGACGACGC CGCTCATGCG GGAAATTGAA
GACCGCTAG
 
Protein sequence
MYGNFSSRHE EFACAFDPPQ GSFLTPQEIE WLAAHPLINL APDPDYPPIE FFDERGNYGG 
IAADYVKIIE TTLGIDFNIV RISNWSDILV AARNRTVDMF GAASATPQRS VYMLFTSPFI
EFPSVIIVRE NVAESLTPKQ LEGMKVAVVD GYADHDFLVN HYPELKLIPV PDVSTGLRQV
SFGTVDAFVA NLASAVYHIE KLGISNLHFG GNTGYSYRMA LAVRSDWPEL SGILEKALSR
IGQRERDLIY RKWIRFETPS PFRKTSFRAC VLTALAIVLV LLPAMVVWNR LLKSLVNSKT
EALREEIAKR IRTEEQLRRA RDELEKRVRE RTTPLMREIE DR