Gene Sfum_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1130 
Symbol 
ID4457956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1407699 
End bp1408784 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content54% 
IMG OID639701897 
Productalginate O-acetyltransferase AlgJ 
Protein accessionYP_845258 
Protein GI116748571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGAA CCCCAACGAA AATCCTTCTG GTCTGCCTGT TGATCCTCAT GTGGTTTCCC 
ATGGCGGAGA TGAACTTGTG CATCTTCAAG GAATATGAGT ATTCCGAGAA CCGCGAATTG
GCGAAAGAGC CCGAATTGAA GGCGGAACTC TCCGCCCTGA GGCGTTTTCC CAAAGACTGC
GAATCCTTTA TCGGCGACCA TCTCGGCTTT CGATGCAGCC TCATCCGGCT CAACAACATT
CTCAGGGTGA ACCTGCTCGG AGTTTCTCCG GTGCCCAGTG TCGTGATGGG CAGGGATTCC
TGGCTGTTCT ACCGCTCGGA GGTCTTCCCG GACGGGTTCA CTTTCAATGA CCACTGCGGC
TTGATCCCGC TCTCCGAGAC CGAGCTCGAC GCTTTGCGTG AACGCATTGA GTGGAACCAT
GAGCTGTTTT CAAGAAACGG TATCTTCTAT ATCGTGGTGA TTGTGCCGAA CAAGAACACG
ATCTACGGGG AATTCCTGCC CGAAAGCATT GTAAGGAACG GCAATCCGAC GCGGCTCGAA
CAATTTTCGG AATACATGCG CAATCACTCG CGGGTCAAGG TCATGGATTT GAGAAGGGCG
CTGCTCAACG CAAAAAAACT TCATCCGATT TACTACAAGA CGGATTCTCA CTGGAACGAT
TTCGGCGCCT ATACCGGCTA CCGCGAGATT ATCGAAGAAC TGTCGAGGGT TTTCCCGGGC
GTCCGCCCCA TATCGATCGA GAACGAAAAG GTCTCGGTGC GCAGGACTTC TCCGGGCGGC
GACCTGGCGC AAATGCTGCT CATGGATGAT CTCATCGATG AGGACCTGAG TACCGCGTTC
GAGATTCAAC CCGATACGGG CGGGAGAAAA CTGGCCAAGC TGTTCTTCAG GCATGATTCT
TTCGGGGACG GTCTCTACCG TTATTTCTAT CCCCACTTCC AGAAAGTGGT GGGAGCGGCC
CCGTTTGTTC CCTTCAACTA CGACAGGATT CTGGCCGAAC GGCCTGAGGT CGTTCTCCAT
GTGTTCGCGG AAAGGTACAT TACGCTGGCC CTCCATGACG ACTTCTTCTA CGAAGGAGCC
CCTTAG
 
Protein sequence
MVRTPTKILL VCLLILMWFP MAEMNLCIFK EYEYSENREL AKEPELKAEL SALRRFPKDC 
ESFIGDHLGF RCSLIRLNNI LRVNLLGVSP VPSVVMGRDS WLFYRSEVFP DGFTFNDHCG
LIPLSETELD ALRERIEWNH ELFSRNGIFY IVVIVPNKNT IYGEFLPESI VRNGNPTRLE
QFSEYMRNHS RVKVMDLRRA LLNAKKLHPI YYKTDSHWND FGAYTGYREI IEELSRVFPG
VRPISIENEK VSVRRTSPGG DLAQMLLMDD LIDEDLSTAF EIQPDTGGRK LAKLFFRHDS
FGDGLYRYFY PHFQKVVGAA PFVPFNYDRI LAERPEVVLH VFAERYITLA LHDDFFYEGA
P