| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1120 |
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| Symbol | |
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| ID | 4457946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1393783 |
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| End bp | 1396200 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639701887 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_845248 |
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| Protein GI | 116748561 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.37757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTCAGA AACCGAGCTA TGAAGAGCTG GCGGGCAGAG TCCGCGAGCT GGAAGAGGAT
GCGCTCGCGC GCAGGCGAAC GAATGAAGTT TTGCGCAAGA GCGAAGAACG CTATCGGATG
ATCTTCAACT ATTCCCCGCT GGGGATCGTC CATTTCGACT GCGACGGACT GATCGTGGAC
TGCAACGAGC GTTTCCTCGA AATCGTGGGA GCTCCCAGGG AACGGCTCCT CGGATTCAAT
ATGGCCACGT CCTTGCGCAA CGAGGAGATG AGAGCCGCGG TAATCGCCGG CCTCTCGGGA
GAGCCCAACT ATTTCGAAGG GGATTATCGG TCCGTGACCG CAAACAAAGT AACCCCCATC
AGGGCCATGT TCAGCCGAGT GAACACCGAC GACGGCGGAT TCATGGGAGC GGTGGGCCTC
TTCGAGGATG TCTCCGCGCA GAAGCAGTCG GAGGAGGCCT TGCGGGAGTC CAGGGAATTT
CTGGGAAAGA TCGTCGCTTC CATCAGCGAC CCCATATTCG TAAAGGACAG ATACCACCGG
CTGATCCTGG TCAACGACGC CGAGTGCGCT CTTGCAGGCA GGACGCGCGA GGAAATCCTC
GGCCGCACCG ACTACGATTT CTTCCCCAAG GAGCAGGTGG ACATCTTCTG GGAAAAGGAT
GAAGCCGTTT TCGAAACCGG GGAGGAGAAC GAAAACGAGG AACAGATAAC GGATGGCCAG
GGACGCACCC GCACGATCGT CACGAAAAAG AGCCTTTACA CGGACAGCTT CGGCAATAAA
TTCATCGTGG GCGTGATACG AGACATAACC GACCGAAAAG AAGCCGAGCT CGCGCTCCAG
GCGGCCCACC AGGAACTTCA GGACATCATT GAATTCCTGC CCGACGCAAC CCTGGTCATC
GGCCGGGACA AAAAGGTGAC GTACTGGAAC CACGCCATCG AAGAAATGAC CGGGGTCCGG
AAGAGCGACA TCCTGGGGAA AGGTGACTAC GCATATGCCA AAGCGTTTTA TGGTAACGGG
AGACCCATGC TCATCGATCT CGTGATGGCC GAGGAACCTG AAATCGAAAG CAGGTATGAT
TTCGTGAAGC GGATCGGCAC GACGGTTTAC GGCGAGGCTT ACGTCCCCGG GGCCTACCGG
GGCAAAGGGG CTTACCTCTG GTCCACGGCG GCTCCGCTCA TCGGCAGGGA CGGGAACATC
ATCGGTTTTA TCCAGTCCAT TCGGGATATT TCGGACCGCA AACGCGCCGA GGAGGCACTC
AAAGAGAACG AGAAGAAATA CCGGCAGCTT TTCGAAACGG TGTCGGACGC CATTCTCGTC
TGCGACGGGG ACAGCCGCCG GTTGATCGAC GTCAACGAGA GGGCCCTGAG CCTCTACGGC
TACTCGCGTG AGGAATTTCT CGATCTGAGT TACCGCGACA TCACGGCGGA ACCCGACGAG
TCGGATGTCG TTATCAAGGA GACGCTCTCC GGGGTGGGGA TACAAGTTCC GCTCCGCACG
CACAGAAAAA AGGACGGGAC GGTTTTCCCG GCGGAGATCT CGTCGAGCAC GTTTGAGCTG
GCAGGCCGAA AAGTCATATG CGGAGTGGTC AGGGACATCA CCGAGCGAAA ACGCGTGGAA
CGGGAGCTTA GTGCATATCG AGACGGCCTC GAGCACCTGA TTGAAGCGCG CACCGCCGAA
CTGGCAAGGG CAAACGAGCG GCTCAAGGTC GAAATAGAGG AGCGCAGGCG GGCGAAGGAG
CGGTTGAAGC TTTTCGCCTA CTCGGTTGCG CACGACCTCA AGAGCCCCGC CGTGGGAATC
CACGGCATCG CGAAGCGCCT CCACAGGCAG ACGCGGGATG TCCTCGATGA AAAGAGCAGG
AGTTACTGCA GCCAAATCCT CAAAGTGTCC GAGCACATCG CCGAGCTTGT GGACAAGATC
AACGTCTACA TCGCAACGAA AGAGGCGCGG CTATCGTTTG AAAGGATTGC CCTCAAGGAG
ATTTTCGCCA TGCTCCGGGA CGAGTTTTCG GTGCAGTTCA ATAACCGTCG GATCGATTGG
GAGCTGCCCG AGTCCGACGT GGTGGTCACG GCTGACAGGC TCTCCCTGTT GAGGGTATTC
AGGAACCTCG TCGACAACGC GCTCAAGTAC GGCGGCGAGC ACCTGAGCAG AATCCGAATC
GGGTACGAGG AAGGCAAAGA CTGTCACATT CTGTCCGTTG CCGACGACGG CAGGGGGCTC
AGGGGGGCCG ATTCGGAGAG AATTTTCGAG GTGTTTCAAC GGCAGGAGAC CTCCAAGGGG
GTCGAAGGCG CAGGCCTGGG CCTGACCATA GTCAGGGAAA TCGCCGAGCA GCACAATGGA
AGAGTCTGGA TGGAGCCGGT CCCCAACGGC GGAGCCTCGT TTTTTGTAAC GATTTCCAAG
GATCTGCCCG TTTCCTGA
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| Protein sequence | MSQKPSYEEL AGRVRELEED ALARRRTNEV LRKSEERYRM IFNYSPLGIV HFDCDGLIVD
CNERFLEIVG APRERLLGFN MATSLRNEEM RAAVIAGLSG EPNYFEGDYR SVTANKVTPI
RAMFSRVNTD DGGFMGAVGL FEDVSAQKQS EEALRESREF LGKIVASISD PIFVKDRYHR
LILVNDAECA LAGRTREEIL GRTDYDFFPK EQVDIFWEKD EAVFETGEEN ENEEQITDGQ
GRTRTIVTKK SLYTDSFGNK FIVGVIRDIT DRKEAELALQ AAHQELQDII EFLPDATLVI
GRDKKVTYWN HAIEEMTGVR KSDILGKGDY AYAKAFYGNG RPMLIDLVMA EEPEIESRYD
FVKRIGTTVY GEAYVPGAYR GKGAYLWSTA APLIGRDGNI IGFIQSIRDI SDRKRAEEAL
KENEKKYRQL FETVSDAILV CDGDSRRLID VNERALSLYG YSREEFLDLS YRDITAEPDE
SDVVIKETLS GVGIQVPLRT HRKKDGTVFP AEISSSTFEL AGRKVICGVV RDITERKRVE
RELSAYRDGL EHLIEARTAE LARANERLKV EIEERRRAKE RLKLFAYSVA HDLKSPAVGI
HGIAKRLHRQ TRDVLDEKSR SYCSQILKVS EHIAELVDKI NVYIATKEAR LSFERIALKE
IFAMLRDEFS VQFNNRRIDW ELPESDVVVT ADRLSLLRVF RNLVDNALKY GGEHLSRIRI
GYEEGKDCHI LSVADDGRGL RGADSERIFE VFQRQETSKG VEGAGLGLTI VREIAEQHNG
RVWMEPVPNG GASFFVTISK DLPVS
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