Gene Sfum_1115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1115 
Symbol 
ID4461087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1386549 
End bp1388639 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content62% 
IMG OID639701882 
Productpeptidase M1, membrane alanine aminopeptidase 
Protein accessionYP_845243 
Protein GI116748556 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTCAC TGCGCAGCGC CTTGTGGGCA TTCATCTTGA GCGGGCTGCT TCCGGGGATT 
ATCACGGAGG CGGGCGCGAA GCCCACGACG TCCATCCACT ACGACATAGC GGTCCGCATC
GAAACCGCTT CCGGGGCTCT CGAGGGTTCG GGCACCGTCA CGGTGCGGGA CGACGGCGCG
ATGCCGCCTG CCTTCACCCT GCGACCCGAT GCGCGCGTCC ATTCGGTGAC CGGATCGGGG
GGCGCCTTGC CTTACCGGTT CGAGGGAGGA GTACTCCGGG TCCCTCAGAG CGCCCTTTCA
AGCCCGGGGG ACCTGAGGAT CACCATTCGG TACGCGGCCG CTTTTCATGA CGCAATCCCC
GGGGATCCCC TCTACACGGA GGATCCGACC TACGGGGTGA CCGGCGTGAT TTCCAAGCGG
GGATTGTTCC TGGCGGATGA TTCGGGATGG TACCCGAAGG TCCCCGGAGC CTTCGGCACA
TACCGCATCC GGGTCGACGT GCCCGCGGGG ATGGAGGTGG TCACCGCGGG GACGCTCAAG
GAGAGAACCC CTGACGGAGA TCGCCTCGAT TTCGTCTGGG AGATCGAGCA GCCCCTGCGC
GGCGTTTCCC TTTCCGGCGG TCCCTACGCG GTGAAGACGG GCCGCGCGGG ACGGATTCCT
TCCTTTTTCT ACCATTTCCC CGGCTCGGAA CGGCTGGCGG AACCCTATCT GAGCGCGGTG
AGCCGCTACA TCGCGCTCTA CGAGGAACTG TTCGGTCCCT ATCCGTTTCC CAAGTTCGCG
GTGGTGGAGA ATTTCTTTCC GACCGGGTAC GGATTCCCTT CTTATACGTT GCTGGGAAGC
CAGGTCATCC GCCTTCCGTT CATTGTCGAT ACCAGCCTCG GCCACGAGGT CGCTCACTCC
TGGTGGGGAA ACGGCGTCTT CGTGGACTAC GGGAAGGGAA ACTGGTCTGA AGGGCTGACG
ACCTACGTTG CGGATCATCT TTACAAGGAA AAAATATCCC CCGAAGAGGC GAGGGAATAC
CGGGCACGAA TCCTGCGCAA TTACGCGACG CTGGTTTCTC CGCGCGAAGA CTTCCCCCTC
GCGGAGTTCG CGGGGCGGGA CAGCCCGGCC TCCAGGGCCG TCGGCTACGG AAAGGGGGCC
ATGGTCTTCC ACATGGCCCG AAAGCTCGCG GGGGACGAAG GATTCTGGCA GGCACTCAAG
GACGTCTGCC AAAAAAGGCT GTTCCAGGAG ACGTCCTGGA GTGACTTTGC GGATGCATTT
GCCGCCCGGA GCCGGGGAAC GGACTTTCAC GCCTTTTTCA GGCAGTGGGT CGATCGCCCG
GGAGCCCCCA CCCTGAGGAT CGACCGAGTG GAAGCGACCA AAGTCGCGCA TGCCTGGAAG
GTCCGAGGGA CCCTTTTGCA GGAGGCGCCC TTTTTTGAGC TGTTTGTCCC CTTGCGGTTG
GAAACCGAAA GCGGTGAGAT TTTTGCCTCG GTGTTCGTCA AGGACCGGGA GACGACCTTT
TCCATCGATG CGGGATCACG TCCCACGCGG CTTACGGTGG ATCCCGATGC GGACCTTTTC
CGACGCCTCC ATCCCGAAGA GGTACCGCCC GACATCAATG CGATCAAAGG CTCGGATGCT
CTTGTGGCGG TCATGGCAGC CGGTCAGGAG GTAATGCTGG ACGGCGCCGC CCGTGCGCTC
CTTTCCGGCC TCGGCCTGCA AGAGCTCGTC GTTGTCCGGG AGAGCGAGCT CCATCCGGCT
CAACTGAAAG GCAGGGACCT GCTCGTTTTC GGTTTCCCCC GCACGAAGCA GCTGTTCGAT
GTTCTTCCCG GAAACCTGAA GGTGGCGACG GAGCACTTCA CCCTGGACGA AACGGTCTAC
GGGGAGCCCG GCGACGGCGC GTTTTTCGCC CTGAGGTCCG GCATCGACAC GAGCAGGAGC
GCTGGGCTTT TTCTCGCCTT CTCCCGGGAA GCCGCAGACG TTCTGGCAAG AAAGATCCCT
CACTACGGGT CCTACAGCGT CGTGGTCATC CGTGACAACA ATGTGGCGGT CAAGAAAGTC
TGGCCGGTGG CGGACTCCCC CTTGATCCAC CGCTTTTCAT TTAGGGAGTG A
 
Protein sequence
MGSLRSALWA FILSGLLPGI ITEAGAKPTT SIHYDIAVRI ETASGALEGS GTVTVRDDGA 
MPPAFTLRPD ARVHSVTGSG GALPYRFEGG VLRVPQSALS SPGDLRITIR YAAAFHDAIP
GDPLYTEDPT YGVTGVISKR GLFLADDSGW YPKVPGAFGT YRIRVDVPAG MEVVTAGTLK
ERTPDGDRLD FVWEIEQPLR GVSLSGGPYA VKTGRAGRIP SFFYHFPGSE RLAEPYLSAV
SRYIALYEEL FGPYPFPKFA VVENFFPTGY GFPSYTLLGS QVIRLPFIVD TSLGHEVAHS
WWGNGVFVDY GKGNWSEGLT TYVADHLYKE KISPEEAREY RARILRNYAT LVSPREDFPL
AEFAGRDSPA SRAVGYGKGA MVFHMARKLA GDEGFWQALK DVCQKRLFQE TSWSDFADAF
AARSRGTDFH AFFRQWVDRP GAPTLRIDRV EATKVAHAWK VRGTLLQEAP FFELFVPLRL
ETESGEIFAS VFVKDRETTF SIDAGSRPTR LTVDPDADLF RRLHPEEVPP DINAIKGSDA
LVAVMAAGQE VMLDGAARAL LSGLGLQELV VVRESELHPA QLKGRDLLVF GFPRTKQLFD
VLPGNLKVAT EHFTLDETVY GEPGDGAFFA LRSGIDTSRS AGLFLAFSRE AADVLARKIP
HYGSYSVVVI RDNNVAVKKV WPVADSPLIH RFSFRE