| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1109 |
|---|
| Symbol | |
|---|
| ID | 4461079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 1379340 |
|---|
| End bp | 1380710 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639701874 |
|---|
| Product | fibronectin, type III |
|---|
| Protein accession | YP_845237 |
|---|
| Protein GI | 116748550 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGACTC CTGTCAACTT TCCAAGGCTT CCGAGAACAA TCCAAATTGT CGTTCCACTG
CTTTTCTTCA GCATCTTGAG CTGCCCGGCC GTGGCATCGG CGGGGTGGGT CCAGCGGTAC
GGCGGCGGGG GAGGGGACTT TGCTACGGGG ATCGCCGTGG ACCGCGGCGG GAACGTCTAT
GTCACGGGCG CTTCGGCGGG TTTCATATCG GGAAACTACA CATACATCGA TTATGCGACG
ATCAAGTATG ACAGGTATGG AAACCGAAAG TGGGTGCGGC GATACAACGG CCCGAAGAAC
TACAATGACG AGGCCGCGGC CATTGCCGTG GACCCCGACG GGAACGTCTA CGTCACGGGC
AAATCGATGG GGCTCTCTTC AGGCTACGAT TATGCAACCG TCAAGTACGA CACGAACGGG
AAGCGGCAGT GGGTGAGACG GTACAACGGC CCTCAGAACA AGAACGACAA AGCCATGGCC
CTGGCCGTTG ACGGCGGCGG GAACGTCTAT GTGACCGGCC GTGTCGACGG CGATGATTAC
GGCCATTTTG CGACCATCAA GTACGATACG AACGGGAAAC GGCAGTGGGT GAGGCATTAC
AAGGGGCCTT GGAACGCCAA AACCCCCGCC GCCATAGCCG TGGACGGCAT CGGAAACGTC
TATGTCTCGG GGGCAGCCGA TCCGGGCACC TTCGACTATG TGACCATCAA GTACGACGCG
GATGGCGGCC TGAAGTGGGA GCGGCACTAC AACGGCCCGG GTGGGCTTTA CGATATGCCC
GCGGCAATGG CCGTGGACCG GAGCGGAAAC GTTTATGTCA CGGGAGGTTC GATGGGGTCG
GAAGATTACG GCTCGCTGGA CTATGCCACC ATCAAGTATG ACACGGAAGG AAACGAGAAG
TGGGTGCGGC GCTACAACGG TCCTCGGAAT GAAAACGATA CGAGTAAGGC CATAGCCGTG
GACTCCGCCG GCAACGTCTA TGTGACGGGC GAAGCCGAGG GCATTTACTC ATCCCTCGAC
TACACGACCA TCAAGTACGA CGCCGATGGA AATCGGCAGT GGATAAAACG CCTCCTGGGG
CCTCGCGATG CGGTTGAGGT TCCCACCGCG ATAGGCGTGG ACTCTGCGGG CAACGTCTAC
GTGACGGGCC AGGTGGAGGG CGCCTCCGGG TACTGGAGGT ATGGAACCGT CAAGTACGAT
ACGGATGGAA ACCGGCAATG GGTGAAGTTC TACTCGGGGG GCGGTACTAG CGTGGCCACT
GCCATGGTCG TGACCGCCGG CGGGAATGTC TATGTCACGG GCATTTCATA TGGCGCGTAC
TCCACCGACG CGGATTATGT CACCATCAAA TACGACACGA ACGGGAACTG A
|
|---|
| Protein sequence | MKTPVNFPRL PRTIQIVVPL LFFSILSCPA VASAGWVQRY GGGGGDFATG IAVDRGGNVY
VTGASAGFIS GNYTYIDYAT IKYDRYGNRK WVRRYNGPKN YNDEAAAIAV DPDGNVYVTG
KSMGLSSGYD YATVKYDTNG KRQWVRRYNG PQNKNDKAMA LAVDGGGNVY VTGRVDGDDY
GHFATIKYDT NGKRQWVRHY KGPWNAKTPA AIAVDGIGNV YVSGAADPGT FDYVTIKYDA
DGGLKWERHY NGPGGLYDMP AAMAVDRSGN VYVTGGSMGS EDYGSLDYAT IKYDTEGNEK
WVRRYNGPRN ENDTSKAIAV DSAGNVYVTG EAEGIYSSLD YTTIKYDADG NRQWIKRLLG
PRDAVEVPTA IGVDSAGNVY VTGQVEGASG YWRYGTVKYD TDGNRQWVKF YSGGGTSVAT
AMVVTAGGNV YVTGISYGAY STDADYVTIK YDTNGN
|
|---|
| |