Gene Sfum_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1103 
Symbol 
ID4460542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1371772 
End bp1372572 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content64% 
IMG OID639701867 
Productcobalt ABC transporter, ATPase subunit 
Protein accessionYP_845231 
Protein GI116748544 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACC ACATCGTGGA AGTCGGGGAC CTGCACTATA CTTATCCGGA TGGGCATTCG 
GCTTTGAGCG GAGTTTCTTT CAGGATCACC CACGGGGAGA CCGTTGCCGT CGTCGGCGCC
AACGGGGCGG GAAAATCGAC CCTGCTCCTG CACTTGAACG GCTGCCTCGT CCCTCAGTCC
GGAACGGTGA GGATCGGCGA TTTCCCCTTG ACCCGCAAGA CCCTGCAGCA TGTCCGGCGG
ACGGTGGGCA TGGTCTTTCA GGATGCCGAC GACCAGCTGT TCATGCCGCA CGTGTACGAC
GATGTGGCCT TCGGGCCGCT GAACCTCGGA TTGCCGCCCG AGGAAGTCGA CCGGCGCGTC
ACGAACGCGC TGAGCACGGT CGGCGCCCTC CACCTCAAAG ATCGCCCCCC CTACCGGCTT
TCGGGAGGCG AGAAAAGGGC CGTGGCCATT GCCTCCGTCC TGTCCATGTC GCCGGACATC
CTGGTGATGG ATGAACCGAC TTCGAACCTG GACCCCAAGT CAAGGCGGCA GCTGATCGAG
CTTCTGCGCA CCTTTCATCA CACGGTGATC GTGGCCACCC ACGACCTCGA TATGGTCCTC
GACCTGTGCT CCCGCATCAT CGTTTTGCAC CGGGGCACGG TGGCCGCCGA CGGTCCCGCC
CGGGAAATCC TCCAGAACGA CGAACTGCTC GACTCCGCCC GGCTGGAAAG ACCCTTGCGC
CTCCAGGGAT GCCCCGTGTG CAGCCCGCGG GAGTCCGGTC CGCGGCAGGG ATTCACGCCC
GACGGGGACG AGTCCCCCTG A
 
Protein sequence
MSHHIVEVGD LHYTYPDGHS ALSGVSFRIT HGETVAVVGA NGAGKSTLLL HLNGCLVPQS 
GTVRIGDFPL TRKTLQHVRR TVGMVFQDAD DQLFMPHVYD DVAFGPLNLG LPPEEVDRRV
TNALSTVGAL HLKDRPPYRL SGGEKRAVAI ASVLSMSPDI LVMDEPTSNL DPKSRRQLIE
LLRTFHHTVI VATHDLDMVL DLCSRIIVLH RGTVAADGPA REILQNDELL DSARLERPLR
LQGCPVCSPR ESGPRQGFTP DGDESP