Gene Sfum_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1100 
Symbol 
ID4460539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1368012 
End bp1368815 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content65% 
IMG OID639701864 
Producthypothetical protein 
Protein accessionYP_845228 
Protein GI116748541 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA GGATTGAAGC GCCGGAAGTC GAGCGGCAGC ACGAGCCGTT GCGGGACGCG 
ATCGCATCCG TCATGGGCCG ATGGGTGAGC GAGCGGCCCG GAGACGATTA CTGGCGCTCT
CCCCTGGTGG GGGTTGCCGC CGCCGAGGAC CCGATGTTCG CCCTGCTGCC GCGGGTGGTC
GACCCCGAAC ACGCCATGCC CGGAGACCTG CTCTCCGGGG CGAGATCGGT GATTGTCTTC
TTTCTGCCGT TTCGGCGGGA GGTTGGAAAC GCCAACGACG CGTCCGGGCG GATGGCCGCG
CGCGGCTGGG CTGAAGCTTA CGTGGCGACG AACAGCCTTA TCGGGGAAAT ATGCCTTCGC
CTCTCCGACC ATCTCGCCGA TGCCGGGCAT CGCTCAGCCG TAACGCCGGC CACGCACAAC
TTCGATGCGG TGAAGCTCGT GAGCCTCTGG TCCCACAAGC ATCTCGGCTA CATCGCCGGA
CTGGGCACCT TCGGGATACA CCACATGCTC ATCACGTCCG CCGGTTGCTG CGGAAGGCTT
GGAAGCGTGG TCACCACCAT GCCTTTGCCT CCGACCTCGA GGCCCGACCG GGAATTCTGC
CTGGAAAAGG CGGGCATCGA GTGTTCGGCG TGCGTTCCCA AGTGCATGCG GGATGCCCTG
GGCGCGGAAC CCTTCGATCG CCGGGCCTGT TACGCGCAAT GCCTTGAAAA CGACAAGCAT
CATGCCGACC TGCCCCTGGT GGATGTGTGC GGCAAGTGCG CGTGCGGGGT GCCTTGCAGC
CACGAAGCCC CGAACCTGCC GTGA
 
Protein sequence
MNQRIEAPEV ERQHEPLRDA IASVMGRWVS ERPGDDYWRS PLVGVAAAED PMFALLPRVV 
DPEHAMPGDL LSGARSVIVF FLPFRREVGN ANDASGRMAA RGWAEAYVAT NSLIGEICLR
LSDHLADAGH RSAVTPATHN FDAVKLVSLW SHKHLGYIAG LGTFGIHHML ITSAGCCGRL
GSVVTTMPLP PTSRPDREFC LEKAGIECSA CVPKCMRDAL GAEPFDRRAC YAQCLENDKH
HADLPLVDVC GKCACGVPCS HEAPNLP