Gene Sfum_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_1099 
Symbol 
ID4460538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp1366924 
End bp1367973 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content57% 
IMG OID639701863 
Producthypothetical protein 
Protein accessionYP_845227 
Protein GI116748540 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCGGTC GAACGACCCG CAAGAGATTC TGGTTGGCCG CAATCTTCGG TCTACTCGTG 
TTCGCGTACA CCCTCAGACA GGCAAGAATG GAAAGACTCG TCCAGAACAT GGGCGAGATC
AACCTGTTCT GGGCCTTTCT CGCCCTGGCC GCCAGCGCCC TCAGCTACAT CTGCATCGGC
ATCGTGCTTC AGCGCCTGCT CCGGGGCGTG GGGCATCCCC TGTCGTTTTC GTCGTCGTTC
AAGATTTCCC TGCTCTCCTG CACCATGAAC TACCTCATGG CCGTAGGCGG ACTGAGCGGC
GTGGCCGCCA AAGTCTACCT GCTGTCCAGG GAGAAGATTC CCCCGAGCAA CACCCTGTCC
ATTTCCATCG TGCACGGGTT TCTCACCAAC ACGGTGGCGG TGGTGTTCAT TTACCTGGGC
TTTTTTTTCC TCTACAGCGA ATACAAGATG GGCACGGCGC AGAAGGAATT CGGCATCGTG
GTCCTGATCG TCGCATTTCT GCTCACCTGG ATCACGATAC AAACGCTGGT GCATGAAGCC
TTCCGCAAGG TTTTCTGGAA GTTTCTGCTC AGGTCCGGCC TCGCCGTCAG CCTCGCGCTC
AAGCATCCTC ACTGGATCAA CGAGGAGCGG GCGGAAGCCT TTTTCGACAA CTTCAACGAA
AGCATGAACC TGCTCATGAG GAAAGCCGGC ATCCTGCTCG TTCCGGCAAC GTTTGCCCTG
CTGGACTGGG TGTTGATGTT CCTCTGCCTG AAGCTCTCGT TCATGGCGGT CCACTACCCG
GTGGACAGCA AATCCCTGCT GCTGGGCTTT TCGATGGGAA TCTTCACGTC GCTCTTCTCC
CTCACCCCGG CATCCATCGG CATCATGGAA GGCTCCATGG CCATATCGTT CTACTGGATG
GGCCTCGACT ACGAGTCCGC CCTGCTGGCC ACGCTGATTT ACAGGCTGGC CTATTATTTC
ATCCCGATCC TGGTGAGCCT GTTCTTCTAC AAACGCTTCT TCCCTGCCCC CGAACGGGTC
AAACCCCTGA GCAAGGCGGA GCCTTCCTGA
 
Protein sequence
MIGRTTRKRF WLAAIFGLLV FAYTLRQARM ERLVQNMGEI NLFWAFLALA ASALSYICIG 
IVLQRLLRGV GHPLSFSSSF KISLLSCTMN YLMAVGGLSG VAAKVYLLSR EKIPPSNTLS
ISIVHGFLTN TVAVVFIYLG FFFLYSEYKM GTAQKEFGIV VLIVAFLLTW ITIQTLVHEA
FRKVFWKFLL RSGLAVSLAL KHPHWINEER AEAFFDNFNE SMNLLMRKAG ILLVPATFAL
LDWVLMFLCL KLSFMAVHYP VDSKSLLLGF SMGIFTSLFS LTPASIGIME GSMAISFYWM
GLDYESALLA TLIYRLAYYF IPILVSLFFY KRFFPAPERV KPLSKAEPS