| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_1091 |
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| Symbol | |
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| ID | 4460530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 1348359 |
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| End bp | 1352567 |
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| Gene Length | 4209 bp |
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| Protein Length | 1402 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639701855 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_845219 |
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| Protein GI | 116748532 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGC ACAGCCCTTA CGTGGGCCCC CGTGCGTACC GTTACGGAGA ACGGCTGTAC
GGGCGCGACC GGGAGTCGCG CGACCTCTTG AACCTGGTCC TGGCCGAGCG CATCGTGCTG
CTCTATTCGC CGTCGGGAGC CGGGAAGTCT TCCCTCCTGG CGGCGAGCCT GGCACCTTTT
CTCGAGAAAG AAGGCTTCCA GGTGCTCGGT CCGGCGAGGG TTTCGGGGGC GCCGGCTCAA
CGTTCCGGCG GCGGTGTCGT GAACCCTTAT GCGGCAAGCC TCATTCACTA CTGGGAAGAC
GCTCGCCCCA AGGAGGTCCG TCCCATCGAC GATTTGGGCG GCATCGACCT CGCCGGTTAC
CTGACGCAGC GTTCGTGGAT ACGCAACGAT CCCGGCCCGA AGGTTCTCAT CCTCGACCAG
TTCGAAGAGA TCATCACGCG AAACCCGCTG GACCGGGATG CCAGGAACGA ATTTTTCCGG
CAGCTGGGAA TATTGCTGCG GGACCGCAAC AGGTGGGCCG TCATCGCCAT GCGCGAGGAA
CACATCGCCG CTCTCGACCC CTGTCTCGAC TATGTGCCGA CCCGCCTCGC CGCCCGCTAC
CGGCTGGATT TGCTGACCCA CGAAACGGCG CGGGAAGCCG TCGCCGGCCC CGCGGAGTCC
GTCGGAGTGG CTTACCATGC CCGGGCTTTG GACAGGCTGA TCCACGAGCT CACGGTGGTG
CGCGAAACCG GTGTCGAGCC GTACCAGACC CCCTACGTGG AACCACTCCA CCTCCAACTG
GCGTGCGACC GCCTGTGGCA GCGGTTGCCC GACGGCACGA CCGAGGTGGG CCCGAAGCTC
GTGGACACTG CGGGCACGGT TGCCGAAGCC CTCGAAGGGT TCTACCGGAG CGCGGTTCAA
GGCGCCCTCC GGCAGGACGC CGTGAAAGAG ACGGGGTGTG ACGAAAAGCG GATCCGGGAC
TGGTTCGAGC GCGAGCTGAT CTCGCCCGCC GGGTTGCGCG ACCAGCTGCA GCGAGGAGGC
ACCTTCACGG GAAGCCTGCC CAACCCGGTC GCCGAGGCGC TGGAGGAACG GTATCTCCTG
CGTTCGGAAA GCCGGCGCGG AACCATCTGG TACGAGATAG CCCACGACAG GCTGCTGGAG
GCCGTCAGGT CCGACAACCG CGCGTGGTAC GGCACCCAGG ACGTATCCAT GCGCCTCCTG
AGAGACGGCG CTGAGCGATA CGGGGCCCAG CGAGGGGGCC GGGCATCGGA TCTCGCCGAG
AGCCGGTTCC TCGCCGGAGA ACCGCTCGAA CGGGTTGAAA CCTGGGCCGC CGCGAACGTG
AAATCGCTCT CGGACGCGGA GAAAGACTAT CTCGACGCCT GCCGCGAGAA CAGGAGAAGG
GAGCAGGACA AGGCCCGCCT GTCGAAAGTG ATCCGCTGGG CCGTCAGGAC CATCCTGGTG
CTTCTGGCAT TGGCGGCCGC GGGGCTGTGG CGTTTCGGAC ACAATGCGCT GGTGGCCCGG
ACCGATGCGC GCGTCCACAG GCTCATCTCC GATGCCGCCC AGGCGCGCTG GCGGGACTGG
GATCACGAGC TTTCCGTCCT TCTGACCCTC CAGGCCGAAA AATTCTCCGA GCGGATCGGG
GTTTCCCCGG AAGTGAAATC GCGCATCATG AACCACCTCC GAAACACCCT GCTGCTGCGC
CCCTTCACGC TGAGCCCGCA GCTCCCTGGC GCCCTCAAGA ACCACGTTGA CTCTCGCAAG
ACGGCCTTCC TTGCCAACTT CCCCGATGAG TGGCTCATCG CCACGGCATC GGGCGAGAAG
AAAATCGAGG TCCTCCCGCT CAGGCGGGAC CGGGAAAACT GCCCCCGACC GGTGCTCGAA
ACCCGCGACG GCATCCGGTC CCTGGCGCCC GGCCCGGCGG GGCGCTACCT GGTGGTCGCC
ACCGAATCCG GCGTCGAGCT GTTTCTTGCG GAAAGGCTCC GTTGCGCGGG GAAGTCGAAC
CTGTCCATCA AGGCTGACGT CCATTTTCCG TTGCCGGCCG CCCCGAGCGG GCCGTTTTGC
ATGACCGCGG ACGACTCCCT CCTCTTCGCT GCAACCGAAG GCGGTCGCAT CGAGTGCCGC
AGCGTCGGCG ACGTAGCGGC ATGCCCCGCC GGCTTTCCCG TCGAATACGG CGGCGACGGC
TTCACCGTCA CGGCCATGGC GTGCGACCCC AAGGGCCGGT GGGTCGCATT GGGAGAGCAG
GCGCCGAGAG GCGCAAAAGG CAGGGTGAGC GTGCTGCCGC TGGAGACAGG AAAGCCTGAG
AGCCCGCGGA TCTTCGAGAA CCTTTTCGAT GACTGGCCCG AGGAGGCGAA AGATTTTCTC
GAAAGACTCC GGGGCTGGCT CGACTACGGG GTCGCAGCGC TCCTGCCGAT GCCGGACGGC
AGCCGGCTGA TCGCCGTTTT CCGGCATGGG CCGATCGGCA TCGTGCCGAT TCCGGATGCC
CTCGATGAAA AGCCTCAAAT GATCTATGCC TGGCCCACCC TGGCCAGCAT AGCCGTTTTG
AAGTCCGGCT TCCAGGTCGG CAGGACCAGC ATGTTCCACC ATCGAATTCC CAAGTTCCTC
GAGGCCGCTC TCATCGGAAA CGAGGGCCTG CTCGCCGTCG GCAGTGAGAA GTTCCTTGGC
GAATGGGACC TCCGGTCGTT TTATGCCGAT CCTTTCGAAA AAGAGCAGGT GAACCTGGAG
GGGCCGAACC CGCCACCGCG CGTCTACGCA GGCTACCGCG AGATCAGGCC GTCCCAGGCT
TCCATCGTGG CATTGAGCGC CCTGGAGGGA GGGAGCGTCC TCGCCGAGCT CGATGCCGAG
CTCAATGCCC GTTTGTGGCT GCGCAACGGC CTCGTGAAAG ACCTGCATTC CACGGTTCCC
GTAAAGCTCG ACAACGGGCG CCCCGAAGAC AACGTGATCT GGACGCTGGG ATTCATGCCC
GGCGGGCGCA TGCTTGTCGC CGGGGGTTCC AGCTATCTCA CCTTCCCTGA AGTGAATCCG
CAGACTCTCG AAAAACCCAA GGGTTCCAAC GCGCTGTGTT ACACGGGAAG CTATCGCAGG
ATGTCCTTGA GCCCGGACGG GCGGCGCCTG GCGGTGGTCG CCAAGGACTA CAGGCGGGTG
ATCGAAGGTT GCCGAACCCC AGCGTCCGGA GGCGTCCATT CCGTCCTGGT GATGGATCTC
GACCGGAAAA CCGGCACCGG CAGCCTGGAT CGGCCCTGGA TCATGGATGT TCCCGACACC
GAGGGTTTGT GGAGTGTCGC CTGGGCGAGA GGGAAATGGA CGGGAGACCG GGACCTCATT
GCGAGCGGGG ATTACACGGG AAAGGTCCGG TTGTGGCTGC TCGACGGAGC CGGGGGCCCG
CCCGAAGACC GAACCCCCCA GATTCTGCCC GGATCGCGCG GCAGCCGCGT CTGGGCGCTC
GCCCTGCACC CGACCGCTCC ATACCTGGCG CTCGGCACCG ACGACGGCGC GCTGGAGATC
TGGCGGCTTG CAATCGATGG TTCCGGGCGG ATCGACGGCG AATTATTGAA AAACCCCGCG
TGGATTCCGC AGGGATCGGT CTGGGCCCTC GCCTGGAGCC CGGACGGGAG CATGCTCGCC
TTCGGCAACG GCGGCGGCTA CGTGGGAGCC GTCTCGACCG CGGACCTGGC GGAAGGCTCC
TGGCGGGTTT CCCAGCGCAG CTTCGCTCAC ATCATGGGGG TGACGTCCAT CGCTTTTTGC
GGCGCTTCCG AAGCGGAGGC GCGCAAACCG CAAAGACCCC GCGCGTGCCG AGGAAACGTG
TTCGCCAGCG CGGGAAATGA CGGCAAGATC ATCCTCTGGG TCTTTTCGAA GGGGGCGAAG
CCACCGGATC TGCTCCGACG GGACCAGGCC CTGGAAGGAG CCGGGGGGGA GGGGGCGAAA
CCGCGGGTTT CCCTCCGCCA GGACCAAACT CTGGAAGGAG CCAGGGGGGA AATCCTCTCC
GTTGCGTTCA GTCCCGACGG AGATCTCGTT GCGGCGGGCG ATACGAGGGG GCAAGTCCAT
GTCTGGCGCG TCGAAAACGA ATCCATTCCG CGGAAAGCCT GCCGCGCCGT GAGTCGCAAC
CTCACCCTGC GGGAATGGGT GGATCACGTC GGGGAGAAGG AAGATTACGA TTGCACGTGC
CCCGACATTC CCCCGGAGCC GGGAGCAACC GGCCGGTCGT GCAGGCAGGC TTCCGCCGGC
GGCTTTTAA
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| Protein sequence | MEKHSPYVGP RAYRYGERLY GRDRESRDLL NLVLAERIVL LYSPSGAGKS SLLAASLAPF
LEKEGFQVLG PARVSGAPAQ RSGGGVVNPY AASLIHYWED ARPKEVRPID DLGGIDLAGY
LTQRSWIRND PGPKVLILDQ FEEIITRNPL DRDARNEFFR QLGILLRDRN RWAVIAMREE
HIAALDPCLD YVPTRLAARY RLDLLTHETA REAVAGPAES VGVAYHARAL DRLIHELTVV
RETGVEPYQT PYVEPLHLQL ACDRLWQRLP DGTTEVGPKL VDTAGTVAEA LEGFYRSAVQ
GALRQDAVKE TGCDEKRIRD WFERELISPA GLRDQLQRGG TFTGSLPNPV AEALEERYLL
RSESRRGTIW YEIAHDRLLE AVRSDNRAWY GTQDVSMRLL RDGAERYGAQ RGGRASDLAE
SRFLAGEPLE RVETWAAANV KSLSDAEKDY LDACRENRRR EQDKARLSKV IRWAVRTILV
LLALAAAGLW RFGHNALVAR TDARVHRLIS DAAQARWRDW DHELSVLLTL QAEKFSERIG
VSPEVKSRIM NHLRNTLLLR PFTLSPQLPG ALKNHVDSRK TAFLANFPDE WLIATASGEK
KIEVLPLRRD RENCPRPVLE TRDGIRSLAP GPAGRYLVVA TESGVELFLA ERLRCAGKSN
LSIKADVHFP LPAAPSGPFC MTADDSLLFA ATEGGRIECR SVGDVAACPA GFPVEYGGDG
FTVTAMACDP KGRWVALGEQ APRGAKGRVS VLPLETGKPE SPRIFENLFD DWPEEAKDFL
ERLRGWLDYG VAALLPMPDG SRLIAVFRHG PIGIVPIPDA LDEKPQMIYA WPTLASIAVL
KSGFQVGRTS MFHHRIPKFL EAALIGNEGL LAVGSEKFLG EWDLRSFYAD PFEKEQVNLE
GPNPPPRVYA GYREIRPSQA SIVALSALEG GSVLAELDAE LNARLWLRNG LVKDLHSTVP
VKLDNGRPED NVIWTLGFMP GGRMLVAGGS SYLTFPEVNP QTLEKPKGSN ALCYTGSYRR
MSLSPDGRRL AVVAKDYRRV IEGCRTPASG GVHSVLVMDL DRKTGTGSLD RPWIMDVPDT
EGLWSVAWAR GKWTGDRDLI ASGDYTGKVR LWLLDGAGGP PEDRTPQILP GSRGSRVWAL
ALHPTAPYLA LGTDDGALEI WRLAIDGSGR IDGELLKNPA WIPQGSVWAL AWSPDGSMLA
FGNGGGYVGA VSTADLAEGS WRVSQRSFAH IMGVTSIAFC GASEAEARKP QRPRACRGNV
FASAGNDGKI ILWVFSKGAK PPDLLRRDQA LEGAGGEGAK PRVSLRQDQT LEGARGEILS
VAFSPDGDLV AAGDTRGQVH VWRVENESIP RKACRAVSRN LTLREWVDHV GEKEDYDCTC
PDIPPEPGAT GRSCRQASAG GF
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